RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 GZMMP51124 257 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 MLF1P58340 268 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 DSTNP60981 165 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 EPS8Q12929 822 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 GAB1Q13480 694 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 EXOSC7Q15024 291 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 LRRC36Q1X8D7 754 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 LRRC23Q53EV4 343 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 TRMT12Q53H54 448 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 B3GNTL1Q67FW5 361 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 FCRLBQ6BAA4 426 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 IGFL3Q6UXB1 125 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 ZBTB49Q6ZSB9 765 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 PATL1Q86TB9 770 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 C9orf40Q8IXQ3 194 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 GPALPP1Q8IXQ4 340 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 TAGAPQ8N103 731 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 OR2L13Q8N349 312 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 SLC15A4Q8N697 577 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 GALNT11Q8NCW6 608 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 C17orf47Q8NEP4 570 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 OR7G2Q8NG99 324 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 C16orf52Q8NHV5 167 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 PSMA8Q8TAA3 256 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 FBXO30Q8TB52 745 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 DOK4Q8TEW6 326 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 THAP3Q8WTV1 239 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 NUDT8Q8WV74 236 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 RASSF5Q8WWW0 418 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 TP53INP1Q96A56 240 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 SLCO4A1Q96BD0 722 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 NEURL3Q96EH8 262 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 PYURFQ96I23 114 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 CHID1Q9BWS9 393 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 OSBPL11Q9BXB4 747 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 CDCP1Q9H5V8 836 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 TRIM45Q9H8W5 580 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 BATF3Q9NR55 127 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 STMN3Q9NZ72 180 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 DNAJB9Q9UBS3 223 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 SNX8Q9Y5X2 465 aa12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 TNRC6AQ8NDV7 1962 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-220ENST00000581737 NUP214P35658 2090 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 CLOCKO15516 846 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 EMC8O43402 210 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 TPST1O60507 370 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 ITGA10O75578 1167 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 CLPSP04118 112 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 EFNA1P20827 205 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 KDELR2P33947 212 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 DCTP40126 519 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 CDK9P50750 372 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 SSR4P51571 173 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 NRG3P56975 720 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 ARG2P78540 354 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 ZNF155Q12901 538 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 TP53BP2Q13625 1128 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 ZNHIT3Q15649 155 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 EIF2S3LQ2VIR3 472 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 OPN5Q6U736 354 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 EIF3MQ7L2H7 374 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 SZRD1Q7Z422 152 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 DND1Q8IYX4 353 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 LILRA2Q8N149 483 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 BEST3Q8N1M1 668 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 TMEM156Q8N614 296 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 HORMAD2Q8N7B1 307 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 SLC35G5Q96KT7 338 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 MS4A4EQ96PG1 132 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 UTP23Q9BRU9 249 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 CACYBPQ9HB71 228 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 SLC6A13Q9NSD5 602 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 NTMQ9P121 344 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 GMPR2Q9P2T1 348 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 ORC6Q9Y5N6 252 aa12.44□□□□□ -0.42
CSNK1D-220ENST00000581737 OR5H15A6NDH6 313 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 WWP2O00308 870 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 UPK1AO00322 258 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 ACOX3O15254 700 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 PRKNO60260 465 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 OR2J2O76002 312 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 ZNF682O95780 498 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 AGR2O95994 175 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 CST1P01037 141 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 ARAFP10398 606 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 ZNF23P17027 643 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 ITGA2P17301 1181 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 POU3F2P20265 443 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 TRHRP34981 398 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 PPICP45877 212 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 TMED10P49755 219 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 EMDP50402 254 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 AQP4P55087 323 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 MRPL49Q13405 166 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 SCARB2Q14108 478 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 GK3PQ14409 553 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 SAXO2Q658L1 398 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 PPP4R4Q6NUP7 873 aa12.43□□□□□ -0.42
CSNK1D-220ENST00000581737 CBLL1Q75N03 491 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms