RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ANGPTL1	O95841	491 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	LAMP1	P11279	417 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ZNF708	P17019	499 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SLC1A6	P48664	564 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PCYT1A	P49585	367 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PRKAG1	P54619	331 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	TLE4	Q04727	773 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	STX3	Q13277	289 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DCST1	Q5T197	706 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OR5M10	Q6IEU7	315 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	KIF18B	Q86Y91	864 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ZNF781	Q8N8C0	355 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SLC16A11	Q8NCK7	471 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	TNIP2	Q8NFZ5	429 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OR7A2P	Q8NGA2	310 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	RAB3IL1	Q8TBN0	382 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ACTRT2	Q8TDY3	377 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SLC9A6	Q92581	669 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	RNASE6	Q93091	150 aa	Known RBP	11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	C1GALT1C1	Q96EU7	318 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	RMND5B	Q96G75	393 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SFXN3	Q9BWM7	321 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	BTBD2	Q9BX70	525 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	HOXD1	Q9GZZ0	328 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CENPH	Q9H3R5	247 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DSN1	Q9H410	356 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PIGU	Q9H490	435 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	KCNK9	Q9NPC2	374 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	EQTN	Q9NQ60	294 aa		11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	FAF1	Q9UNN5	650 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CCDC168	Q8NDH2	2452 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708		A0A1W2PQD3	144 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	GXYLT2	A0PJZ3	443 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	WDR91	A4D1P6	747 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	C7orf72	A4D263	438 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	HCRTR2	O43614	444 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ITM2A	O43736	263 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SCO2	O43819	266 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	GOSR1	O95249	250 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	HMGN2	P05204	90 aa	Known RBP	11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ACP2	P11117	423 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	G6PD	P11413	515 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	HPGD	P15428	266 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ZNF17	P17021	662 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	HK1	P19367	917 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	BMP5	P22003	454 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CCT3	P49368	545 aa	Known RBP	11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ZNF136	P52737	540 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CLDN18	P56856	261 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	B3GALT5-AS1	P59052	145 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	POU6F2	P78424	691 aa	Predicted RBP	11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SORD	Q00796	357 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MPP2	Q14168	576 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DUSP5	Q16690	384 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DPY19L1	Q2PZI1	675 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	GRAMD1B	Q3KR37	738 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OR2A2	Q6IF42	318 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CDC73	Q6P1J9	531 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	POMZP3	Q6PJE2	187 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ARSK	Q6UWY0	536 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CHMP1B	Q7LBR1	199 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SZRD1	Q7Z422	152 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MTERF4	Q7Z6M4	381 aa	Known RBP	11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MARCH3	Q86UD3	253 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	MEIOB	Q8N635	442 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	COX18	Q8N8Q8	333 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	NAXE	Q8NCW5	288 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	VPS37A	Q8NEZ2	397 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	OR8J2	Q8NGG1	315 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DUSP19	Q8WTR2	217 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PIK3R3	Q92569	461 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	SH3GL2	Q99962	352 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	TUBA1C	Q9BQE3	449 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ZNF559	Q9BR84	538 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	C1orf50	Q9BV19	199 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DUSP26	Q9BV47	211 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	ACTRT3	Q9BYD9	372 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	PIGM	Q9H3S5	423 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	JKAMP	Q9P055	326 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	CLCF1	Q9UBD9	225 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	L3MBTL1	Q9Y468	752 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	AP4B1	Q9Y6B7	739 aa		11.4	□□□□□ -0.58
CDK5RAP3-222	ENST00000581708	DOCK7	Q96N67	2140 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	DUXA	A6NLW8	204 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	CLCA1	A8K7I4	914 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	SLCO1B7	G3V0H7	640 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	RNASET2	O00584	256 aa	Known RBP	11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	NDUFB5	O43674	189 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	TNFRSF21	O75509	655 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	OXSR1	O95747	527 aa	Predicted RBP	11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	AK1	P00568	194 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	IGKV1D-16	P01601	117 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	DGKQ	P52824	942 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	FGFBP1	Q14512	234 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	SPDYE7P	Q495Y7	208 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	HHAT	Q5VTY9	493 aa		11.39	□□□□□ -0.59
CDK5RAP3-222	ENST00000581708	RAET1L	Q5VY80	246 aa		11.39	□□□□□ -0.59

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