RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 RPH3AQ9Y2J0 694 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-220ENST00000581707 KIAA1549Q9HCM3 1950 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 MYO9AB2RTY4 2548 aa17.69■□□□□ 0.42
SREBF1-220ENST00000581707 H0Y3Z8 333 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 CFLARO15519 480 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 SSTR2P30874 369 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 STARP49675 285 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 MAGOHP61326 146 aaKnown RBP17.68■□□□□ 0.42
SREBF1-220ENST00000581707 C17orf67Q0P5P2 114 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 LASP1Q14847 261 aaKnown RBP17.68■□□□□ 0.42
SREBF1-220ENST00000581707 SPDYE7PQ495Y7 208 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 EXOSC6Q5RKV6 272 aaKnown RBP17.68■□□□□ 0.42
SREBF1-220ENST00000581707 APOOLQ6UXV4 268 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 CAMKMTQ7Z624 323 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 COX18Q8N8Q8 333 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 NAXEQ8NCW5 288 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 OR56A1Q8NGH5 318 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 OR4C3Q8NH37 302 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 MGARPQ8TDB4 240 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 OTUB1Q96FW1 271 aaPredicted RBP17.68■□□□□ 0.42
SREBF1-220ENST00000581707 CHMP6Q96FZ7 201 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 TUBA1CQ9BQE3 449 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 NUF2Q9BZD4 464 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 CXorf36Q9H7Y0 433 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 PTGES2Q9H7Z7 377 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 TMBIM4Q9HC24 238 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 DOCK7Q96N67 2140 aa17.68■□□□□ 0.42
SREBF1-220ENST00000581707 DVL2O14641 736 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 ANGPTL1O95841 491 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 HK1P19367 917 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 LHX2P50458 406 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 SLC18A1P54219 525 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 B3GALT5-AS1P59052 145 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 TP53BP2Q13625 1128 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 GANABQ14697 944 aaKnown RBP17.67■□□□□ 0.42
SREBF1-220ENST00000581707 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.67■□□□□ 0.42
SREBF1-220ENST00000581707 DMRTC2Q8IXT2 367 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-220ENST00000581707 STACQ99469 402 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 BTBD2Q9BX70 525 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 ACTRT3Q9BYD9 372 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 PIGUQ9H490 435 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 NEUROD4Q9HD90 331 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 DUSP22Q9NRW4 184 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 GIN1Q9NXP7 522 aa17.67■□□□□ 0.42
SREBF1-220ENST00000581707 ZNF629Q9UEG4 869 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-220ENST00000581707 FAF1Q9UNN5 650 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-220ENST00000581707 IGLV3-32A0A0A0MS00 114 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 MBD3L4A6NDZ8 208 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-220ENST00000581707 MBD3L3A6NE82 208 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-220ENST00000581707 MBD3L5A6NJ08 208 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-220ENST00000581707 ALG1L2C9J202 215 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 OXSR1O95747 527 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-220ENST00000581707 NGFRP08138 427 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 LBPP18428 481 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 TBXA2RP21731 343 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 BMP5P22003 454 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 LCN1P31025 176 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 HBA1P69905 142 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 POU6F2P78424 691 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-220ENST00000581707 BCL2A1Q16548 175 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 CDC73Q6P1J9 531 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 ZAR1Q86SH2 424 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 LRRC34Q8IZ02 419 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 MBD3L2Q8NHZ7 208 aaPredicted RBP17.66■□□□□ 0.42
SREBF1-220ENST00000581707 SFXN5Q8TD22 340 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 CDS1Q92903 461 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 MOAP1Q96BY2 351 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 TLCD1Q96CP7 247 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 C1GALT1C1Q96EU7 318 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 C14orf79Q96F83 325 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 G6PC3Q9BUM1 346 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 DPY30Q9C005 99 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 MEAF6Q9HAF1 191 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 HHATLQ9HCP6 504 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 UBQLN4Q9NRR5 601 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 THAP1Q9NVV9 213 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 FBXO34Q9NWN3 711 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 NKIRAS1Q9NYS0 192 aa17.66■□□□□ 0.42
SREBF1-220ENST00000581707 CSMD1Q96PZ7 3565 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 NDUFB5O43674 189 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 SOX30O94993 753 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 KRT16P08779 473 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 HPGDP15428 266 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 ZNF708P17019 499 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 ZNF136P52737 540 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 CLDN18P56856 261 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 CCNJQ5T5M9 372 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 RAET1LQ5VY80 246 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 OR4F3Q6IEY1 312 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 C9orf106Q8NAJ2 232 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 RELL2Q8NC24 303 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-220ENST00000581707 ADAMTS15Q8TE58 950 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 UCN2Q96RP3 112 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 GPATCH2Q9NW75 528 aa17.65■□□□□ 0.42
SREBF1-220ENST00000581707 CLCA1A8K7I4 914 aa17.64■□□□□ 0.41
SREBF1-220ENST00000581707 GMFGO60234 142 aa17.64■□□□□ 0.41
SREBF1-220ENST00000581707 PEPDP12955 493 aa17.64■□□□□ 0.41
SREBF1-220ENST00000581707 CTSSP25774 331 aa17.64■□□□□ 0.41
SREBF1-220ENST00000581707 SOAT1P35610 550 aa17.64■□□□□ 0.41
SREBF1-220ENST00000581707 DGKQP52824 942 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms