RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 C9orf43Q8TAL5 461 aaPredicted RBP13.13□□□□□ -0.31
SKA2-205ENST00000580541 PAQR8Q8TEZ7 354 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 ABHD17AQ96GS6 310 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 TRIM8Q9BZR9 551 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 LRMDAQ9H2I8 198 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.13□□□□□ -0.31
SKA2-205ENST00000580541 CD300AQ9UGN4 299 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 MKLN1Q9UL63 735 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 KLF13Q9Y2Y9 288 aaPredicted RBP13.13□□□□□ -0.31
SKA2-205ENST00000580541 CELSR3Q9NYQ7 3312 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 FRYQ5TBA9 3013 aa13.13□□□□□ -0.31
SKA2-205ENST00000580541 A0A1W2PQD3 144 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 ERVH48-1M5A8F1 160 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 KIAA0513O60268 411 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 FCMRO60667 390 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 SLC25A12O75746 678 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 C1QCP02747 245 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 CHRM4P08173 479 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 CNR1P21554 472 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 DCTP40126 519 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 CHRNEQ04844 493 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 ELOAQ14241 798 aaKnown RBP13.12□□□□□ -0.31
SKA2-205ENST00000580541 ZNF141Q15928 474 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 TYW3Q6IPR3 259 aaKnown RBP13.12□□□□□ -0.31
SKA2-205ENST00000580541 SLC25A25Q6KCM7 469 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 C19orf48Q6RUI8 117 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 ASB18Q6ZVZ8 466 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 CCDC80Q76M96 950 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 CMIPQ8IY22 773 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 FAM98AQ8NCA5 519 aaKnown RBP13.12□□□□□ -0.31
SKA2-205ENST00000580541 OR10G3Q8NGC4 313 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 LZICQ8WZA0 190 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 HGDQ93099 445 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 WBP1Q96G27 269 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 SLC38A1Q9H2H9 487 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 EVA1AQ9H8M9 152 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 ANKRD10Q9NXR5 420 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 PLA2G3Q9NZ20 509 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 KLRF1Q9NZS2 232 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 MAGEL2Q9UJ55 1249 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 SLC13A4Q9UKG4 626 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 PRDM4Q9UKN5 801 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 DTNAQ9Y4J8 743 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 CPAMD8Q8IZJ3 1885 aa13.12□□□□□ -0.31
SKA2-205ENST00000580541 PRAMEF25A6NGN4 478 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 AGAP5A6NIR3 686 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 ALG1L2C9J202 215 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 GTPBP1O00178 669 aaKnown RBP13.11□□□□□ -0.31
SKA2-205ENST00000580541 CXCR6O00574 342 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 NDUFB5O43674 189 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 RRP9O43818 475 aaKnown RBP13.11□□□□□ -0.31
SKA2-205ENST00000580541 ZNF354AO60765 605 aaPredicted RBP13.11□□□□□ -0.31
SKA2-205ENST00000580541 IGKV1D-16P01601 117 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 THBS1P07996 1170 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 SP1P08047 785 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 TCN1P20061 433 aaPredicted RBP13.11□□□□□ -0.31
SKA2-205ENST00000580541 EVI2BP34910 448 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 TNFSF10P50591 281 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 C17orf67Q0P5P2 114 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 TRAP1Q12931 704 aaKnown RBP13.11□□□□□ -0.31
SKA2-205ENST00000580541 TRIM25Q14258 630 aaKnown RBP13.11□□□□□ -0.31
SKA2-205ENST00000580541 COL28A1Q2UY09 1125 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 GRAMD1BQ3KR37 738 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 LIN52Q52LA3 116 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 KLHL26Q53HC5 615 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 GLYATQ6IB77 296 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 SPINK14Q6IE38 97 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 FRRS1Q6ZNA5 592 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 EIF3MQ7L2H7 374 aaKnown RBP13.11□□□□□ -0.31
SKA2-205ENST00000580541 PTRH1Q86Y79 214 aaKnown RBP13.11□□□□□ -0.31
SKA2-205ENST00000580541 ARMC8Q8IUR7 673 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 PSD4Q8NDX1 1056 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 OR4C3Q8NH37 302 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 OR52P1PQ8NH57 321 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 FIG4Q92562 907 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 RNF145Q96MT1 663 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 RAB3IPQ96QF0 476 aaPredicted RBP13.11□□□□□ -0.31
SKA2-205ENST00000580541 TRIM15Q9C019 465 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 ADPRHL2Q9NX46 363 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 KLHL28Q9NXS3 571 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 SEC14L3Q9UDX4 400 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 SLC35A3Q9Y2D2 325 aa13.11□□□□□ -0.31
SKA2-205ENST00000580541 CHCHD2Q9Y6H1 151 aaPredicted RBP13.11□□□□□ -0.31
SKA2-205ENST00000580541 PRAMEF27A3QJZ7 478 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 M0QX08 132 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 FADS1O60427 444 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 ICOSLGO75144 302 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 UGT2B17O75795 530 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 NEURL1O76050 574 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 OXSR1O95747 527 aaPredicted RBP13.1□□□□□ -0.31
SKA2-205ENST00000580541 MSX1P28360 303 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 KDELR2P33947 212 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 ADH7P40394 386 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 CASP3P42574 277 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 NCALDP61601 193 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 KCNJ2P63252 427 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 KCNJ10P78508 379 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 FUT5Q11128 374 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 CEACAM7Q14002 265 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms