RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 GLYR1Q49A26 553 aaPredicted RBP13.47□□□□□ -0.25
SS18-212ENST00000579061 OR5M10Q6IEU7 315 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 BHLHB9Q6PI77 547 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 GDF7Q7Z4P5 450 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 COX18Q8N8Q8 333 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 OR8J2Q8NGG1 315 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 DUSP19Q8WTR2 217 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 TESCQ96BS2 214 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 C16orf58Q96GQ5 468 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 PPP1R36Q96LQ0 422 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 SFXN2Q96NB2 322 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 UCN2Q96RP3 112 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 G6PC3Q9BUM1 346 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 BTBD2Q9BX70 525 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 ACTRT3Q9BYD9 372 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 TBL1XR1Q9BZK7 514 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 UCK2Q9BZX2 261 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 DPY30Q9C005 99 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 PIGUQ9H490 435 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 CXorf36Q9H7Y0 433 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 SNX8Q9Y5X2 465 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 ABCA12Q86UK0 2595 aa13.47□□□□□ -0.25
SS18-212ENST00000579061 MED12LQ86YW9 2145 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 DCHS2Q6V1P9 2916 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 KIAA1549Q9HCM3 1950 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 NKX2-6A6NCS4 301 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 MBD3L4A6NDZ8 208 aaPredicted RBP13.46□□□□□ -0.25
SS18-212ENST00000579061 MBD3L3A6NE82 208 aaPredicted RBP13.46□□□□□ -0.25
SS18-212ENST00000579061 MBD3L5A6NJ08 208 aaPredicted RBP13.46□□□□□ -0.25
SS18-212ENST00000579061 TRPC5OSA6NMA1 111 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 B4DXG7 233 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 SLCO1B7G3V0H7 640 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 RNASET2O00584 256 aaKnown RBP13.46□□□□□ -0.25
SS18-212ENST00000579061 ANKRD28O15084 1053 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 HDAC3O15379 428 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 CFLARO15519 480 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 ANGPTL1O95841 491 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 TBXA2RP21731 343 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 LHX2P50458 406 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 LASP1Q14847 261 aaKnown RBP13.46□□□□□ -0.25
SS18-212ENST00000579061 BCL2A1Q16548 175 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 PGS1Q32NB8 556 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 APOOLQ6UXV4 268 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 MARCH3Q86UD3 253 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 GOT1L1Q8NHS2 421 aaPredicted RBP13.46□□□□□ -0.25
SS18-212ENST00000579061 MBD3L2Q8NHZ7 208 aaPredicted RBP13.46□□□□□ -0.25
SS18-212ENST00000579061 MGARPQ8TDB4 240 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 RTN4RQ9BZR6 473 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 TRIM8Q9BZR9 551 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 MANSC1Q9H8J5 431 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 UBQLN4Q9NRR5 601 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 GPATCH2Q9NW75 528 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 MED11Q9P086 117 aa13.46□□□□□ -0.25
SS18-212ENST00000579061 ZNF629Q9UEG4 869 aaPredicted RBP13.46□□□□□ -0.25
SS18-212ENST00000579061 FAF1Q9UNN5 650 aaPredicted RBP13.46□□□□□ -0.25
SS18-212ENST00000579061 A0A1W2PQD3 144 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 SDHDO14521 159 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 DVL2O14641 736 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 KLF11O14901 512 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 OXSR1O95747 527 aaPredicted RBP13.45□□□□□ -0.26
SS18-212ENST00000579061 SNRPB2P08579 225 aaKnown RBP13.45□□□□□ -0.26
SS18-212ENST00000579061 PEPDP12955 493 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 PRF1P14222 555 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 ZNF708P17019 499 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 SSTR2P30874 369 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 CLNS1AP54105 237 aaKnown RBP13.45□□□□□ -0.26
SS18-212ENST00000579061 WNT3P56703 355 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 B3GALT5-AS1P59052 145 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 HBA1P69905 142 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 TP53BP2Q13625 1128 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 SPDYE7PQ495Y7 208 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 ANXA8L1Q5VT79 327 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 OR4F3Q6IEY1 312 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 MEX3BQ6ZN04 569 aaKnown RBP13.45□□□□□ -0.26
SS18-212ENST00000579061 SPATA19Q7Z5L4 167 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 ADGRE4PQ86SQ3 457 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 LIX1LQ8IVB5 337 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 MISPQ8IVT2 679 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 TNIP2Q8NFZ5 429 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 OR4C3Q8NH37 302 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 FBXO30Q8TB52 745 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 ADAMTS15Q8TE58 950 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 NUDT8Q8WV74 236 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 JADE3Q92613 823 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 C14orf79Q96F83 325 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 TRIB1Q96RU8 372 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 YIPF4Q9BSR8 244 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 SLC24A3Q9HC58 644 aa13.45□□□□□ -0.26
SS18-212ENST00000579061 NPDC1Q9NQX5 325 aaPredicted RBP13.45□□□□□ -0.26
SS18-212ENST00000579061 CREBBPQ92793 2442 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 PRSS51A0A1B0GVH4 220 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 C17orf51A8MQB3 221 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 H0Y3Z8 333 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 NDUFB5O43674 189 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 SCN2BO60939 215 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 HK1P19367 917 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 CLDN18P56856 261 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 OCRLQ01968 901 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 STX5Q13190 355 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 FIGNL1Q6PIW4 674 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms