RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	GFM2	Q969S9	779 aa	Known RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ATP6V1E2	Q96A05	226 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PGM2	Q96G03	612 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ZNF764	Q96H86	408 aa	Predicted RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	C18orf12	Q96KH6	178 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SFXN2	Q96NB2	322 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CENPK	Q9BS16	269 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PINK1	Q9BXM7	581 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SRXN1	Q9BYN0	137 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	C20orf27	Q9GZN8	174 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	COQ10B	Q9H8M1	238 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ZNF395	Q9H8N7	513 aa	Predicted RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ANKZF1	Q9H8Y5	726 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NEUROD4	Q9HD90	331 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	MID1IP1	Q9NPA3	183 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PLSCR4	Q9NRQ2	329 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	GPATCH2	Q9NW75	528 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	OXSM	Q9NWU1	459 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	FAM120C	Q9NX05	1096 aa	Known RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	AHSP	Q9NZD4	102 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	KLRF1	Q9NZS2	232 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PRODH2	Q9UF12	536 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	MTRF1L	Q9UGC7	380 aa	Known RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	FOXD3	Q9UJU5	478 aa	Predicted RBP	3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PACSIN3	Q9UKS6	424 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	TMCO1	Q9UM00	188 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CLEC4A	Q9UMR7	237 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SNX6	Q9UNH7	406 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DNAJC15	Q9Y5T4	150 aa		3.98	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NPIPA5	A0A0B4J1W7	369 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	EXOC1L	A0A1B0GW35	172 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	GNG14	A0A1W2PPG7	69 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329		A0A1W2PRB8	838 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	C7orf72	A4D263	438 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SLC22A20	A6NK97	555 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CAPN14	A8MX76	684 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	FAM47E-STBD1	D6RA91	191 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NPIPA7	E9PJI5	369 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329		H7C1Q1	480 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	OVOL3	O00110	214 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ETV2	O00321	342 aa	Predicted RBP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ANKRD28	O15084	1053 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	GMFG	O60234	142 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	RAMP1	O60894	148 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SS18L1	O75177	396 aa	Predicted RBP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NDUFS7	O75251	213 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	KCNK2	O95069	426 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	H6PD	O95479	791 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ANGPTL1	O95841	491 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	KRT6A	P02538	564 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	KRT6B	P04259	564 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ENO1	P06733	434 aa	Known RBP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CRH	P06850	196 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	HEXA	P06865	529 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NGFR	P08138	427 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SOD3	P08294	240 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	IFI6	P09912	130 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DANCR	P0C864	163 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NPIPA8	P0DM63	369 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	LAMP1	P11279	417 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	BCKDHA	P12694	445 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	HK1	P19367	917 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DNASE1	P24855	282 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	GABRA3	P34903	492 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PHB	P35232	272 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DEK	P35659	375 aa	Known RBP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ETV4	P43268	484 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	KRT6C	P48668	564 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PRIM2	P49643	509 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NCBP2	P52298	156 aa	Known RBP eCLIP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	FOXG1	P55316	489 aa	Predicted RBP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	DSCR4	P56555	118 aa	Predicted RBP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	NKX6-1	P78426	367 aa	Predicted RBP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PHEX	P78562	749 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ZNF117	Q03924	483 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ACSM2A	Q08AH3	577 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	FUT5	Q11128	374 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ZNF155	Q12901	538 aa	Predicted RBP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	MPP2	Q14168	576 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	PON3	Q15166	354 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	TOMM20	Q15388	145 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	MAPK11	Q15759	364 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ACKR1	Q16570	336 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CYP27C1	Q4G0S4	372 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	KLHL26	Q53HC5	615 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SPIN4	Q56A73	249 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329		Q5PR19	223 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	SH2D4B	Q5SQS7	431 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	TEX35	Q5T0J7	233 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	KANK2	Q63ZY3	851 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	ACSM2B	Q68CK6	577 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	FIGNL1	Q6PIW4	674 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	RNF165	Q6ZSG1	346 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	TRMT10C	Q7L0Y3	403 aa	Known RBP	3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	CAMKMT	Q7Z624	323 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	GRAMD2A	Q8IUY3	354 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	P3H2	Q8IVL5	708 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	C10orf107	Q8IVU9	208 aa		3.97	□□□□□ -1.77
PPP4R1-209	ENST00000578329	RIMKLA	Q8IXN7	391 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms