RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ZZZ3Q8IYH5 903 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 MICU2Q8IYU8 434 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 RNF148Q8N7C7 305 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 DOK4Q8TEW6 326 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 OIT3Q8WWZ8 545 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 SLC9A6Q92581 669 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 RAB8BQ92930 207 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 HSPBAP1Q96EW2 488 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 LCORQ96JN0 433 aaPredicted RBP7.4□□□□□ -1.22
COPS3-215ENST00000578317 FER1L6-AS2Q96M78 137 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 CCDC140Q96MF4 163 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 BTBD2Q9BX70 525 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 MTHFD2LQ9H903 347 aaPredicted RBP7.4□□□□□ -1.22
COPS3-215ENST00000578317 Q9N2J8 555 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 POLE3Q9NRF9 147 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 CALML5Q9NZT1 146 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 ACTR3BQ9P1U1 418 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 P2RX2Q9UBL9 471 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 POMPQ9Y244 141 aa7.4□□□□□ -1.22
COPS3-215ENST00000578317 DMXL2Q8TDJ6 3036 aa7.4□□□□□ -1.23
COPS3-215ENST00000578317 FER1L5A0AVI2 2057 aa7.4□□□□□ -1.23
COPS3-215ENST00000578317 A0A0G2JPF8 293 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 TMEM247A6NEH6 219 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 A8MVJ9 347 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 C1QTNF9BB2RNN3 333 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 HNRNPCL2B2RXH8 293 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 HNRNPCL3B7ZW38 293 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 TLX3O43711 291 aaPredicted RBP7.39□□□□□ -1.23
COPS3-215ENST00000578317 PGM3O95394 542 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 HNRNPCL4P0DMR1 293 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 ACP2P11117 423 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 ETS2P15036 469 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 GGT1P19440 569 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 PCGF2P35227 344 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 PIGAP37287 484 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 CRISP3P54108 245 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 CASP9P55211 416 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 PCBP3P57721 371 aaKnown RBP7.39□□□□□ -1.23
COPS3-215ENST00000578317 MS4A2Q01362 244 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 CHAF1BQ13112 559 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 SCARB2Q14108 478 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 MAPK11Q15759 364 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 BTBD16Q32M84 506 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 CRB2Q5IJ48 1285 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 DCAF10Q5QP82 559 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 GLYATQ6IB77 296 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 REEP3Q6NUK4 255 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 CDPF1Q6NVV7 123 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 IFNEQ86WN2 208 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 SLC15A4Q8N697 577 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 HIPK4Q8NE63 616 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 OR5D16Q8NGK9 328 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 GPR151Q8TDV0 419 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 KCNE4Q8WWG9 221 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 GATA6Q92908 595 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 UBL7Q96S82 380 aaPredicted RBP7.39□□□□□ -1.23
COPS3-215ENST00000578317 SDF2Q99470 211 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 TREX2Q9BQ50 279 aaPredicted RBP7.39□□□□□ -1.23
COPS3-215ENST00000578317 YIPF4Q9BSR8 244 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 DEFB126Q9BYW3 111 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 WWTR1Q9GZV5 400 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 ZNF160Q9HCG1 818 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 EQTNQ9NQ60 294 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 MYOTQ9UBF9 498 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 FBXL4Q9UKA2 621 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 ANGPTL2Q9UKU9 493 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 DTX4Q9Y2E6 619 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 SNX13Q9Y5W8 968 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 MRPS18BQ9Y676 258 aaKnown RBP7.39□□□□□ -1.23
COPS3-215ENST00000578317 KCNE3Q9Y6H6 103 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 SDK2Q58EX2 2172 aa7.39□□□□□ -1.23
COPS3-215ENST00000578317 AQP12BA6NM10 295 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 ZNF891A8MT65 544 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 CXCR6O00574 342 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 NME6O75414 186 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 GMNNO75496 209 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 STX11O75558 287 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 GCM2O75603 506 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 PDE5AO76074 875 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 KCNK2O95069 426 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 NR2F1P10589 423 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 TCN1P20061 433 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 HOXC12P31275 282 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 KDELR2P33947 212 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 MSX2P35548 267 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 PSMD4P55036 377 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 GFRA1P56159 465 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 CORO7P57737 925 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 POU6F2P78424 691 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 MRPS22P82650 360 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 ZNF155Q12901 538 aaPredicted RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 AIMP2Q13155 320 aaKnown RBP7.38□□□□□ -1.23
COPS3-215ENST00000578317 SYPL1Q16563 259 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.38□□□□□ -1.23
COPS3-215ENST00000578317 HLA-DQA1Q5Y7H0 255 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 LCN8Q6JVE9 175 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 NPSR1Q6W5P4 371 aa7.38□□□□□ -1.23
COPS3-215ENST00000578317 PATL1Q86TB9 770 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms