RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 OR2M5A3KFT3 312 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 LYPLA1O75608 230 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 RAF1P04049 648 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 HRGP04196 525 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 IL11P20809 199 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 MAPK1P28482 360 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 SERPINB4P48594 390 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 STARP49675 285 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 CLDN15P56746 228 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 C21orf58P58505 322 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 RPS3AP61247 264 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 RFTN2Q52LD8 501 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 FAM219BQ5XKK7 198 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 OR5M10Q6IEU7 315 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 GTPBP8Q8N3Z3 284 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 CCDC63Q8NA47 563 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 DUSP19Q8WTR2 217 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 GFM2Q969S9 779 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 STARD4Q96DR4 205 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 GIMAP5Q96F15 307 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 PPP3R2Q96LZ3 170 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 STACQ99469 402 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 TBL1XR1Q9BZK7 514 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 TUBB1Q9H4B7 451 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 GLRX2Q9NS18 164 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 CCM2LQ9NUG4 571 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 ATP6V1HQ9UI12 483 aa13.08□□□□□ -0.32
SMARCE1-213ENST00000578044 SH3D21A4FU49 640 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 SNUPNO95149 360 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 UTS2O95399 124 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 ANGPTL1O95841 491 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 TGM6O95932 706 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 HK1P19367 917 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 GABRA3P34903 492 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 MANFP55145 182 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 SRYQ05066 204 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 SMU1Q2TAY7 513 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 XKR7Q5GH72 579 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 RAET1LQ5VY80 246 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 CLEC6AQ6EIG7 209 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 MFSD12Q6NUT3 480 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 ZNF551Q7Z340 670 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 MTERF4Q7Z6M4 381 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 OR2T11Q8NH01 316 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 EPS8L3Q8TE67 593 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 ZBTB8AQ96BR9 441 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 SLC39A3Q9BRY0 314 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 TMEM109Q9BVC6 243 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 UBQLN4Q9NRR5 601 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 ZNF337Q9Y3M9 751 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 TESMINQ9Y4I5 508 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 TRAF6Q9Y4K3 522 aa13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 NSD1Q96L73 2696 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-213ENST00000578044 ADAMDEC1O15204 470 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 SCO2O43819 266 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 NME6O75414 186 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 ATE1O95260 518 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 CGAP01215 116 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 KRT16P08779 473 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 BCKDHAP12694 445 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 CD99P14209 185 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 CD79BP40259 229 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 KIR2DL2P43627 348 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 CPA2P48052 419 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 PRIM2P49643 509 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 EMBQ6PCB8 327 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 APOOLQ6UXV4 268 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 P4HA3Q7Z4N8 544 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 EXOC3L1Q86VI1 746 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 KIRREL3Q8IZU9 778 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 NUP43Q8NFH3 380 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 CDC26Q8NHZ8 85 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 OIT3Q8WWZ8 545 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 MOAP1Q96BY2 351 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 PIP5K1AQ99755 562 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 YIPF4Q9BSR8 244 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 RTN4RQ9BZR6 473 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 OR10A4Q9H209 315 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 NEUROD4Q9HD90 331 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 ATAD3AQ9NVI7 634 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 BEX4Q9NWD9 120 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 MED11Q9P086 117 aa13.06□□□□□ -0.32
SMARCE1-213ENST00000578044 CASKO14936 926 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 NDUFB5O43674 189 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 TMCC2O75069 709 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 KCNK2O95069 426 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 OXSR1O95747 527 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 PPP3CBP16298 524 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 PSMA4P25789 261 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 ADH6P28332 368 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 GPC1P35052 558 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 HPCAL1P37235 193 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 EIF1P41567 113 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 RAC1P63000 192 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 HSPB3Q12988 150 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 GRAMD1BQ3KR37 738 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 ZNF385BQ569K4 471 aa13.05□□□□□ -0.32
SMARCE1-213ENST00000578044 ARL13AQ5H913 290 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms