RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 RNF217Q8TC41 542 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 VMP1Q96GC9 406 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 SLC38A2Q96QD8 506 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 OR51E2Q9H255 320 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 HMG20AQ9NP66 347 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 NLGN3Q9NZ94 848 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 KLHL3Q9UH77 587 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 IGHV5-51A0A0C4DH38 117 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 CLDN25C9JDP6 229 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 LMO7DNF2Z398 122 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 STK25O00506 426 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 NKX2-2O95096 273 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 NSA2O95478 260 aaKnown RBP13.05□□□□□ -0.32
VPS33B-208ENST00000574755 CKMT1AP12532 417 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 NXPH1P58417 271 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 EFNB1P98172 346 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 FAM53BQ14153 422 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 ZNHIT3Q15649 155 aaPredicted RBP13.05□□□□□ -0.32
VPS33B-208ENST00000574755 TSTQ16762 297 aaKnown RBP13.05□□□□□ -0.32
VPS33B-208ENST00000574755 FLYWCH1Q4VC44 716 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 SLC25A30Q5SVS4 291 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 NIPAL1Q6NVV3 410 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 METTL27Q8N6F8 245 aaPredicted RBP13.05□□□□□ -0.32
VPS33B-208ENST00000574755 TMCO5AQ8N6Q1 288 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 FNDC8Q8TC99 324 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 MMABQ96EY8 250 aaPredicted RBP13.05□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF582Q96NG8 517 aaPredicted RBP13.05□□□□□ -0.32
VPS33B-208ENST00000574755 PRRG3Q9BZD7 231 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 SLIRPQ9GZT3 109 aaKnown RBP13.05□□□□□ -0.32
VPS33B-208ENST00000574755 KRCC1Q9NPI7 259 aaPredicted RBP13.05□□□□□ -0.32
VPS33B-208ENST00000574755 CLEC2DQ9UHP7 191 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 OSGIN1Q9UJX0 560 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 PLCL2Q9UPR0 1127 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 GPR52Q9Y2T5 361 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 PMF1-BGLAPU3KQ54 211 aa13.05□□□□□ -0.32
VPS33B-208ENST00000574755 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 TRAPPC13A5PLN9 417 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 TLCD2A6NGC4 264 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 TGFBR3LH3BV60 316 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 CCRL2O00421 344 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 CLDN4O14493 209 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 CTNSO60931 367 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 KCNK2O95069 426 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 GNSP15586 552 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 CSNK1EP49674 416 aaKnown RBP13.04□□□□□ -0.32
VPS33B-208ENST00000574755 TUBA1BP68363 451 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 PSG6Q00889 435 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 RHAGQ02094 409 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 TMED1Q13445 227 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 LINC00299Q6ZSB3 139 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 USP43Q70EL4 1123 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 TUBA1AQ71U36 451 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF595Q8IYB9 648 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF614Q8N883 585 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 TMEM163Q8TC26 289 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 OSTF1Q92882 214 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 CHCHD6Q9BRQ6 235 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 MND1Q9BWT6 205 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 CHRDQ9H2X0 955 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 PDE7BQ9NP56 450 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 PRTFDC1Q9NRG1 225 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 UCKL1Q9NWZ5 548 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 WNT16Q9UBV4 365 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 PCDH15Q96QU1 1955 aa13.04□□□□□ -0.32
VPS33B-208ENST00000574755 OR2W5A6NFC9 320 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 RHPN2P1A8MT19 583 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 HRO43593 1189 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 S1PR1P21453 382 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 HTR2AP28223 471 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 SSTR4P31391 388 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 IDUAP35475 653 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 UGT2B10P36537 528 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 STAT5AP42229 794 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 BTG2P78543 158 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 ZNF846Q147U1 533 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 OR1Q1Q15612 314 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 C14orf28Q4W4Y0 310 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 SOWAHCQ53LP3 525 aaPredicted RBP13.03□□□□□ -0.32
VPS33B-208ENST00000574755 NKAIN2Q5VXU1 208 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 SLC30A6Q6NXT4 461 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 SLC36A4Q6YBV0 504 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 ZAR1Q86SH2 424 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 C17orf82Q86X59 251 aaPredicted RBP13.03□□□□□ -0.32
VPS33B-208ENST00000574755 OR6C4Q8NGE1 309 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 SPACA7Q96KW9 195 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 DGAT2Q96PD7 388 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 NELL2Q99435 816 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 FOLH1BQ9HBA9 442 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 PALMDQ9NP74 551 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 POLE3Q9NRF9 147 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 IL20Q9NYY1 176 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 TP53BP1Q12888 1972 aaPredicted RBP13.03□□□□□ -0.32
VPS33B-208ENST00000574755 SNTNA6NMZ2 147 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 HRKO00198 91 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 MYL12BO14950 172 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 CSO75390 466 aaKnown RBP13.03□□□□□ -0.32
VPS33B-208ENST00000574755 CH25HO95992 272 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 GABRA4P48169 554 aa13.03□□□□□ -0.32
VPS33B-208ENST00000574755 EMDP50402 254 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms