RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 C3orf30Q96M34 536 aa18.79■□□□□ 0.6
CHRNB1-204ENST00000572857 MS4A4EQ96PG1 132 aa18.79■□□□□ 0.6
CHRNB1-204ENST00000572857 C1orf50Q9BV19 199 aa18.79■□□□□ 0.6
CHRNB1-204ENST00000572857 ACBD3Q9H3P7 528 aa18.79■□□□□ 0.6
CHRNB1-204ENST00000572857 LIME1Q9H400 295 aa18.79■□□□□ 0.6
CHRNB1-204ENST00000572857 NTMQ9P121 344 aa18.79■□□□□ 0.6
CHRNB1-204ENST00000572857 ZDHHC2Q9UIJ5 367 aa18.79■□□□□ 0.6
CHRNB1-204ENST00000572857 OR2M5A3KFT3 312 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 SLC22A20A6NK97 555 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 H3BML4 177 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 SEC14L5O43304 696 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 BPGMP07738 259 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 DDX5P17844 614 aaKnown RBP18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 MAP3K8P41279 467 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 SUCLG1P53597 346 aaKnown RBP18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 PRR5P85299 388 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 GANABQ14697 944 aaKnown RBP18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 DUSP5Q16690 384 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 XKR7Q5GH72 579 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 MFSD12Q6NUT3 480 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 WDR93Q6P2C0 686 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 LRIG3Q6UXM1 1119 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 GATSQ8NAP1 163 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 OR4C3Q8NH37 302 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 GOT1L1Q8NHS2 421 aaPredicted RBP18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 PPP1R14CQ8TAE6 165 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 SMPDL3BQ92485 455 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 HOXB13Q92826 284 aaPredicted RBP18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 CHMP6Q96FZ7 201 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 PIGQQ9BRB3 760 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 ATP6V1HQ9UI12 483 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 SNX8Q9Y5X2 465 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 AKAP9Q99996 3911 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 HIVEP1P15822 2718 aa18.78■□□□□ 0.6
CHRNB1-204ENST00000572857 A0A1W2PRB8 838 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 SHISA8B8ZZ34 492 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 SCAMP2O15127 329 aaKnown RBP18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 HCRTR2O43614 444 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 KCNK2O95069 426 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 ALOX5P09917 674 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 LAMP1P11279 417 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 EPXP11678 715 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 SERPINB5P36952 375 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 IST1P53990 364 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 CLDN15P56746 228 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 PTGR1Q14914 329 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 KRT71Q3SY84 523 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 C6orf136Q5SQH8 315 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 IL23RQ5VWK5 629 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 SPNS3Q6ZMD2 512 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 ZAR1Q86SH2 424 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 CDC20BQ86Y33 519 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 NUDCD3Q8IVD9 361 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 FNDC5Q8NAU1 212 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 NUDT8Q8WV74 236 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 PINK1Q9BXM7 581 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 PIGMQ9H3S5 423 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 ZCCHC3Q9NUD5 404 aaKnown RBP18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 GALNT8Q9NY28 637 aa18.77■□□□□ 0.6
CHRNB1-204ENST00000572857 AKAP6Q13023 2319 aa18.77■□□□□ 0.59
CHRNB1-204ENST00000572857 A0A1W2PNV4 684 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 FAM221AA4D161 298 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 WDR91A4D1P6 747 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 LINC01387J3KSC0 135 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 NDUFB5O43674 189 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 TYROBPO43914 113 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 SMNDC1O75940 238 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 OXSR1O95747 527 aaPredicted RBP18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 RPL3P39023 403 aaKnown RBP18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 DIO3P55073 304 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 CLDN20P56880 219 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 EEFSECP57772 596 aaKnown RBP18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 SORDQ00796 357 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 DAZAP2Q15038 168 aaPredicted RBP18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 CCNJQ5T5M9 372 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 CPTPQ5TA50 214 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 KRTCAP2Q8N6L1 136 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 COX18Q8N8Q8 333 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 CNEP1R1Q8N9A8 125 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 FIG4Q92562 907 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 TUBGCP3Q96CW5 907 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 FAM120BQ96EK7 910 aaKnown RBP18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 PKNOX2Q96KN3 472 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 TMEM109Q9BVC6 243 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 SIRT3Q9NTG7 399 aaPredicted RBP18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 CCM2LQ9NUG4 571 aaPredicted RBP18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 FBXO34Q9NWN3 711 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 PACSIN3Q9UKS6 424 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 VDAC3Q9Y277 283 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 CELSR1Q9NYQ6 3014 aa18.76■□□□□ 0.59
CHRNB1-204ENST00000572857 IGLV3-32A0A0A0MS00 114 aa18.75■□□□□ 0.59
CHRNB1-204ENST00000572857 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.75■□□□□ 0.59
CHRNB1-204ENST00000572857 ALG1L2C9J202 215 aa18.75■□□□□ 0.59
CHRNB1-204ENST00000572857 CTIFO43310 598 aaKnown RBP18.75■□□□□ 0.59
CHRNB1-204ENST00000572857 TNFSF13O75888 250 aa18.75■□□□□ 0.59
CHRNB1-204ENST00000572857 HPGDP15428 266 aa18.75■□□□□ 0.59
CHRNB1-204ENST00000572857 TBXA2RP21731 343 aa18.75■□□□□ 0.59
CHRNB1-204ENST00000572857 CPOXP36551 454 aa18.75■□□□□ 0.59
CHRNB1-204ENST00000572857 PRIM2P49643 509 aa18.75■□□□□ 0.59
CHRNB1-204ENST00000572857 EEF1A1P68104 462 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms