RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 FCN2Q15485 313 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 SMARCD3Q6STE5 483 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 ERN2Q76MJ5 926 aaKnown RBP10.06□□□□□ -0.8
CCDC40-207ENST00000572253 GET4Q7L5D6 327 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-207ENST00000572253 NKAIN4Q8IVV8 208 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 OR10H4Q8NGA5 316 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 RAB11FIP5Q9BXF6 653 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 MRPS30Q9NP92 439 aaKnown RBP10.06□□□□□ -0.8
CCDC40-207ENST00000572253 EMC7Q9NPA0 242 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 HINT3Q9NQE9 182 aaKnown RBP10.06□□□□□ -0.8
CCDC40-207ENST00000572253 KLHL1Q9NR64 748 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 SLC23A2Q9UGH3 650 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 ACSL5Q9ULC5 683 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 MYO10Q9HD67 2058 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 SHISA3A0PJX4 238 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 FAM86C2PA6NEL3 165 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 C1QTNF3-AMACRE9PGA6 284 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 AGR2O95994 175 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 TAS2R43P59537 309 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 HNRNPA1L2Q32P51 320 aaKnown RBP10.06□□□□□ -0.8
CCDC40-207ENST00000572253 KLHL12Q53G59 568 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 EOGTQ5NDL2 527 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 PLBD1Q6P4A8 553 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF793Q6ZN11 406 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 TMEM91Q6ZNR0 172 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 TPRA1Q86W33 373 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 GPALPP1Q8IXQ4 340 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 ACOT4Q8N9L9 421 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 BBS1Q8NFJ9 593 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 C12orf66Q96MD2 445 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 TBX5Q99593 518 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 NDC1Q9BTX1 674 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 ACTRT3Q9BYD9 372 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 NUBP2Q9Y5Y2 271 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 PLXND1Q9Y4D7 1925 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 TRAV6A0A075B6T7 132 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 PPM1DO15297 605 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 STATHP02808 62 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 CD53P19397 219 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 UQCRC1P31930 480 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 MC3RP41968 323 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 RFX3P48380 749 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 SLC16A1P53985 500 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 EPHA5P54756 1037 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 ARHGEF6Q15052 776 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 EIPR1Q53HC9 387 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 WASH2PQ6VEQ5 465 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 B3GLCTQ6Y288 498 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 RFPL4BQ6ZWI9 263 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 MEPCEQ7L2J0 689 aaKnown RBP10.06□□□□□ -0.8
CCDC40-207ENST00000572253 GDF7Q7Z4P5 450 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 OAFQ86UD1 273 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 TP53I13Q8NBR0 393 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-207ENST00000572253 NRTNQ99748 197 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 C11orf49Q9H6J7 331 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 INPP5EQ9NRR6 644 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 IL20RAQ9UHF4 553 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 RASD1Q9Y272 281 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 GPR55Q9Y2T6 319 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-207ENST00000572253 KCNE3Q9Y6H6 103 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 A0A0A6YYJ9 748 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 A0A1W2PR48 441 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 UNC119BA6NIH7 251 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 ZSCAN5BA6NJL1 495 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 PGRMC2O15173 223 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 STX11O75558 287 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 AIFM1O95831 613 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 NPR2P20594 1047 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 RAB28P51157 221 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 LAMTOR1Q6IAA8 161 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 ADGRD2Q7Z7M1 963 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 RANBP3LQ86VV4 465 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-207ENST00000572253 CDK20Q8IZL9 346 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 TOMM5Q8N4H5 51 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 CNRIP1Q96F85 164 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-207ENST00000572253 C1QTNF2Q9BXJ5 285 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 CLEC4MQ9H2X3 399 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-207ENST00000572253 UBQLN3Q9H347 655 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 NUDT15Q9NV35 164 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 COPZ2Q9P299 210 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 MGAT4AQ9UM21 535 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 GPSM3Q9Y4H4 160 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 ATG4BQ9Y4P1 393 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 A0A1W2PPV9 198 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 PAHP00439 452 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 CISD3P0C7P0 127 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 AHCYP23526 432 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 ATP5A1P25705 553 aaKnown RBP10.05□□□□□ -0.8
CCDC40-207ENST00000572253 PITPNAQ00169 270 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF750Q32MQ0 723 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 PLA1AQ53H76 456 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 SLC48A1Q6P1K1 146 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 MTSS1LQ765P7 747 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 TIGD4Q8IY51 512 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 C9orf62Q8N4C0 152 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 SIRT6Q8N6T7 355 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 OR5W2Q8NH69 310 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 FANK1Q8TC84 345 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 OR2M2Q96R28 347 aa10.05□□□□□ -0.8
CCDC40-207ENST00000572253 FN3KQ9H479 309 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms