RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 PCSK2P16519 638 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 FEN1P39748 380 aaKnown RBP15.92■□□□□ 0.14
CLK3-227ENST00000570296 ARFIP2P53365 341 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 MORF4L2Q15014 288 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 CARTPTQ16568 116 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 ZSWIM7Q19AV6 140 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 PDSS1Q5T2R2 415 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 HBMQ6B0K9 141 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 SLC48A1Q6P1K1 146 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 ZC3HC1Q86WB0 502 aaKnown RBP15.92■□□□□ 0.14
CLK3-227ENST00000570296 TUSC5Q8IXB3 177 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 ABHD3Q8WU67 409 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 VSTM2LQ96N03 204 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 JMJD8Q96S16 334 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 NAP1L3Q99457 506 aaPredicted RBP15.92■□□□□ 0.14
CLK3-227ENST00000570296 INPP5KQ9BT40 448 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 PCDHB10Q9UN67 800 aa15.92■□□□□ 0.14
CLK3-227ENST00000570296 IGLV3-32A0A0A0MS00 114 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 TNFSF11O14788 317 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 LYZL6O75951 148 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 SEMA3DO95025 777 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 PGM3O95394 542 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 CD40P25942 277 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 CHN2P52757 468 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 DVL1P1P54792 670 aaPredicted RBP15.91■□□□□ 0.14
CLK3-227ENST00000570296 CDH15P55291 814 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 RAC1P63000 192 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 MRPS35P82673 323 aaKnown RBP15.91■□□□□ 0.14
CLK3-227ENST00000570296 SPOCK1Q08629 439 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 ACAP2Q15057 778 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 KLHL17Q6TDP4 642 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 UGT2A3Q6UWM9 527 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 NPSR1Q6W5P4 371 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 TRIM58Q8NG06 486 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 OR2W6PQ8NHA6 318 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 DUSP19Q8WTR2 217 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 ERP27Q96DN0 273 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 MTBPQ96DY7 904 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 REXO5Q96IC2 774 aaKnown RBP15.91■□□□□ 0.14
CLK3-227ENST00000570296 RTN4RQ9BZR6 473 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 PCDHA9Q9Y5H5 950 aa15.91■□□□□ 0.14
CLK3-227ENST00000570296 C1orf226A1L170 272 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 LRP5LA4QPB2 252 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 H0YIV9 168 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 K7EPI3 171 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 ERAL1O75616 437 aaKnown RBP15.9■□□□□ 0.14
CLK3-227ENST00000570296 GGT1P19440 569 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 CLK3P49761 638 aaKnown RBP15.9■□□□□ 0.14
CLK3-227ENST00000570296 OR4D1Q15615 310 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 LTB4RQ15722 352 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 ZNF239Q16600 458 aaKnown RBP15.9■□□□□ 0.14
CLK3-227ENST00000570296 MYLK4Q86YV6 388 aaPredicted RBP15.9■□□□□ 0.14
CLK3-227ENST00000570296 GTPBP8Q8N3Z3 284 aaPredicted RBP15.9■□□□□ 0.14
CLK3-227ENST00000570296 ZNF675Q8TD23 568 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 OSTF1Q92882 214 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 SORCS2Q96PQ0 1159 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 PLAC1Q9HBJ0 212 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 MYNNQ9NPC7 610 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 FAM120CQ9NX05 1096 aaKnown RBP15.9■□□□□ 0.14
CLK3-227ENST00000570296 OPTCQ9UBM4 332 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 ADAM29Q9UKF5 820 aa15.9■□□□□ 0.14
CLK3-227ENST00000570296 A0A087WZY1 265 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 A0A0J9YW62 118 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 OR5H1A6NKK0 313 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 FOXE1O00358 373 aaPredicted RBP15.89■□□□□ 0.13
CLK3-227ENST00000570296 WISP3O95389 354 aaPredicted RBP15.89■□□□□ 0.13
CLK3-227ENST00000570296 YES1P07947 543 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 TACSTD2P09758 323 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 APEX1P27695 318 aaKnown RBP15.89■□□□□ 0.13
CLK3-227ENST00000570296 APOBEC3AP31941 199 aaPredicted RBP15.89■□□□□ 0.13
CLK3-227ENST00000570296 ATP6V0D1P61421 351 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 TCHHL1Q5QJ38 904 aaPredicted RBP15.89■□□□□ 0.13
CLK3-227ENST00000570296 LIPJQ5W064 366 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 PPIL6Q8IXY8 311 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 SPATA6LQ8N4H0 392 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 UBTD2Q8WUN7 234 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 PSME2Q9UL46 239 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 VDAC3Q9Y277 283 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 OR10H1Q9Y4A9 318 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 PSAT1Q9Y617 370 aa15.89■□□□□ 0.13
CLK3-227ENST00000570296 C7orf72A4D263 438 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 GUCY1B2O75343 617 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 BANF1O75531 89 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 OPN1LWP04000 364 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 CD1DP15813 335 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 COX5AP20674 150 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 ME2P23368 584 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 IL2RGP31785 369 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 CARD18P57730 90 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 DUSP2Q05923 314 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 SWI5Q1ZZU3 235 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 ERCC6LQ2NKX8 1250 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 TRMT10BQ6PF06 316 aaKnown RBP15.88■□□□□ 0.13
CLK3-227ENST00000570296 SLC44A2Q8IWA5 706 aaPredicted RBP15.88■□□□□ 0.13
CLK3-227ENST00000570296 OR4N2Q8NGD1 307 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 MRPL24Q96A35 216 aaKnown RBP15.88■□□□□ 0.13
CLK3-227ENST00000570296 KLHL29Q96CT2 875 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 SERPINI1Q99574 410 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 TIGARQ9NQ88 270 aa15.88■□□□□ 0.13
CLK3-227ENST00000570296 RGS9O75916 674 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms