RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ZIC3O60481 467 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 SCN2BO60939 215 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 OXSR1O95747 527 aaPredicted RBP11.82□□□□□ -0.52
CNOT1-220ENST00000569916 ANGPTL1O95841 491 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 NGFRP08138 427 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 KITP10721 976 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 COX6B1P14854 86 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 CPN1P15169 458 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 EPHA3P29320 983 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 SOAT1P35610 550 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 ZFP36L2P47974 494 aaKnown RBP11.82□□□□□ -0.52
CNOT1-220ENST00000569916 CLK3P49761 638 aaKnown RBP11.82□□□□□ -0.52
CNOT1-220ENST00000569916 LHX2P50458 406 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 DSCR4P56555 118 aaPredicted RBP11.82□□□□□ -0.52
CNOT1-220ENST00000569916 B3GALT5-AS1P59052 145 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 PHC1P78364 1004 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 POU6F2P78424 691 aaPredicted RBP11.82□□□□□ -0.52
CNOT1-220ENST00000569916 SPDYE7PQ495Y7 208 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 TTMPQ5BVD1 217 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 NSUN5P2Q63ZY6 315 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 LACC1Q8IV20 430 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 LIX1LQ8IVB5 337 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 WDR75Q8IWA0 830 aaKnown RBP11.82□□□□□ -0.52
CNOT1-220ENST00000569916 NAXEQ8NCW5 288 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 OR4C3Q8NH37 302 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 CDS1Q92903 461 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 MOAP1Q96BY2 351 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 ATP6V1G3Q96LB4 118 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 SFXN2Q96NB2 322 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 BTBD2Q9BX70 525 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 ACTRT3Q9BYD9 372 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 TBL1XR1Q9BZK7 514 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 ENKD1Q9H0I2 346 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 PIGUQ9H490 435 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 NPDC1Q9NQX5 325 aaPredicted RBP11.82□□□□□ -0.52
CNOT1-220ENST00000569916 AIG1Q9NVV5 245 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 MED11Q9P086 117 aa11.82□□□□□ -0.52
CNOT1-220ENST00000569916 RPH3AQ9Y2J0 694 aaPredicted RBP11.82□□□□□ -0.52
CNOT1-220ENST00000569916 ITPR2Q14571 2701 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 GOLGA8QA0A0J9YX86 632 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 GOLGA8OA6NCC3 632 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 MBD3L4A6NDZ8 208 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 MBD3L3A6NE82 208 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 MBD3L5A6NJ08 208 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 TRPC5OSA6NMA1 111 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 ALG1L2C9J202 215 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 FAM47E-STBD1D6RA91 191 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 E9PBE3 544 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 GOLGA8NF8WBI6 632 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 SNRPB2P08579 225 aaKnown RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 KRT16P08779 473 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 H2AFXP16104 143 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 IGFBP2P18065 325 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 TBXA2RP21731 343 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 TCEA1P23193 301 aaKnown RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 LCN1P31025 176 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 CEACAM8P31997 349 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 STARP49675 285 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 CLNS1AP54105 237 aaKnown RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 CLDN18P56856 261 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 GANABQ14697 944 aaKnown RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 SPANXN4Q5MJ08 99 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 ENPP6Q6UWR7 440 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 MAVSQ7Z434 540 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 MCEMP1Q8IX19 187 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 TNIP2Q8NFZ5 429 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 MBD3L2Q8NHZ7 208 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 ZPLD1Q8TCW7 415 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 DUSP19Q8WTR2 217 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 C1GALT1C1Q96EU7 318 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 CHMP6Q96FZ7 201 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 MAELQ96JY0 434 aaKnown RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 TEX37Q96LM6 180 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 TRIB1Q96RU8 372 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 TREX2Q9BQ50 279 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 G6PC3Q9BUM1 346 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 TRIM8Q9BZR9 551 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 SERHL2Q9H4I8 314 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 WDR55Q9H6Y2 383 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 FAF1Q9UNN5 650 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-220ENST00000569916 KCNE3Q9Y6H6 103 aa11.81□□□□□ -0.52
CNOT1-220ENST00000569916 RNF103-CHMP3A0A140T963 221 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 CD8B2A6NJW9 211 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 HSPB2A8KAH6 182 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 SLCO1B7G3V0H7 640 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 H0Y3Z8 333 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 ZNF195O14628 629 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 ZNF708P17019 499 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 HK1P19367 917 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 CHMP24386 653 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 MSX1P28360 303 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 TIMP3P35625 211 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 RPS26P62854 115 aaKnown RBP11.8□□□□□ -0.52
CNOT1-220ENST00000569916 SRYQ05066 204 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 C17orf67Q0P5P2 114 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 RCAN2Q14206 197 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 SF3B4Q15427 424 aaKnown RBP eCLIP11.8□□□□□ -0.522e-10■■■■■ 35.2
CNOT1-220ENST00000569916 HSPB2Q16082 182 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 DPY19L1Q2PZI1 675 aa11.8□□□□□ -0.52
CNOT1-220ENST00000569916 FAM174BQ3ZCQ3 159 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms