RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 UBQLN4Q9NRR5 601 aa11.33□□□□□ -0.6
NUP93-220ENST00000569842 ACTR3BQ9P1U1 418 aa11.33□□□□□ -0.6
NUP93-220ENST00000569842 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
NUP93-220ENST00000569842 GPC6Q9Y625 555 aaPredicted RBP11.33□□□□□ -0.6
NUP93-220ENST00000569842 AGAP5A6NIR3 686 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 NPIPB9F8W1W9 429 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 ACOT8O14734 319 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 LCN1P31025 176 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 CD96P40200 585 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 CASRP41180 1078 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 CRYBA2P53672 197 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 ATP12AP54707 1039 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 TUBA3CQ13748 450 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 TUBA3EQ6PEY2 450 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 DHFR2Q86XF0 187 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 PEX5LQ8IYB4 626 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 DND1Q8IYX4 353 aaKnown RBP11.32□□□□□ -0.6
NUP93-220ENST00000569842 ZNF614Q8N883 585 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 SPPL2AQ8TCT8 520 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 TAMM41Q96BW9 452 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 TMCO6Q96DC7 493 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 RAB3IPQ96QF0 476 aaPredicted RBP11.32□□□□□ -0.6
NUP93-220ENST00000569842 HOXD1Q9GZZ0 328 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 RYDENQ9NUL5 291 aaKnown RBP11.32□□□□□ -0.6
NUP93-220ENST00000569842 ZZEF1O43149 2961 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 TP53I11O14683 189 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 PDE9AO76083 593 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 HPGDP15428 266 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 POLE2P56282 527 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 FOXK2Q01167 660 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 TRAP1Q12931 704 aaKnown RBP11.32□□□□□ -0.6
NUP93-220ENST00000569842 PDZK1Q5T2W1 519 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 VRK2Q86Y07 508 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 SPPL2CQ8IUH8 684 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 ARMC8Q8IUR7 673 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 SMYD1Q8NB12 490 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 OR52P1PQ8NH57 321 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 SLC26A7Q8TE54 656 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 TTC9Q92623 222 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 PMM1Q92871 262 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 MUC13Q9H3R2 512 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 GORASP2Q9H8Y8 452 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 LRFN1Q9P244 771 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 CHCHD2Q9Y6H1 151 aaPredicted RBP11.32□□□□□ -0.6
NUP93-220ENST00000569842 CNTRLQ7Z7A1 2325 aa11.32□□□□□ -0.6
NUP93-220ENST00000569842 SERPINB7O75635 380 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 CIB2O75838 187 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 MFN2O95140 757 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 STAMBPO95630 424 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 OXSR1O95747 527 aaPredicted RBP11.31□□□□□ -0.6
NUP93-220ENST00000569842 SERPINA1P01009 418 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 IL7RP16871 459 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 ATP6V1B2P21281 511 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 TBXA2RP21731 343 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 DMTNQ08495 405 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 FLOT2Q14254 428 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 ZNF141Q15928 474 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 SPINK14Q6IE38 97 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 MDGA2Q7Z553 956 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 ZNF227Q86WZ6 799 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 GPALPP1Q8IXQ4 340 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 ZNF527Q8NB42 609 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 SGCZQ96LD1 299 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 NSMCE2Q96MF7 247 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 SPATA5L1Q9BVQ7 753 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 RSPO3Q9BXY4 272 aaPredicted RBP11.31□□□□□ -0.6
NUP93-220ENST00000569842 CACYBPQ9HB71 228 aaKnown RBP11.31□□□□□ -0.6
NUP93-220ENST00000569842 SEC14L3Q9UDX4 400 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 SCDO00767 359 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 DBIP07108 87 aaKnown RBP11.31□□□□□ -0.6
NUP93-220ENST00000569842 PABPC4LP0CB38 370 aaKnown RBP11.31□□□□□ -0.6
NUP93-220ENST00000569842 RPS4Y1P22090 263 aaKnown RBP11.31□□□□□ -0.6
NUP93-220ENST00000569842 EVI2BP34910 448 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 KLHL26Q53HC5 615 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 ZNF311Q5JNZ3 666 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 C1orf146Q5VVC0 180 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 BICRALQ6AI39 1079 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 APOOLQ6UXV4 268 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 RTL4Q6ZR62 310 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 OR10Q1Q8NGQ4 319 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 GRHL3Q8TE85 626 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 SIGLEC12Q96PQ1 595 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 SMAD5Q99717 465 aaKnown RBP11.31□□□□□ -0.6
NUP93-220ENST00000569842 TRIM45Q9H8W5 580 aaPredicted RBP11.31□□□□□ -0.6
NUP93-220ENST00000569842 PCDHGA9Q9Y5G4 932 aaKnown RBP11.31□□□□□ -0.6
NUP93-220ENST00000569842 DSPP15924 2871 aaKnown RBP11.31□□□□□ -0.6
NUP93-220ENST00000569842 OR5H15A6NDH6 313 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 CFAP73A6NFT4 308 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 CLDN24A6NM45 220 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 MKRN2OSH3BPM6 223 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 FADS1O60427 444 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 IFNA14P01570 189 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 ITGB2P05107 769 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 CCL3P10147 92 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 ERFP50548 548 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 ARG2P78540 354 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 OR1C1Q15619 314 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 CYBRD1Q53TN4 286 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 SLC22A10Q63ZE4 541 aa11.31□□□□□ -0.6
NUP93-220ENST00000569842 LCN8Q6JVE9 175 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms