RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 SCN2AQ99250 2005 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 A0A0G2JPF8 293 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 SLC35F4A4IF30 521 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 OR6C65A6NJZ3 312 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 HNRNPCL3B7ZW38 293 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 SNPHO15079 494 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 PLRG1O43660 514 aaKnown RBP8.19□□□□□ -1.1
LINC00558-201ENST00000569422 ZIC2O95409 532 aaPredicted RBP8.19□□□□□ -1.1
LINC00558-201ENST00000569422 SLC35G6P0C7Q6 338 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 HNRNPCL4P0DMR1 293 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 TNFSF8P32971 234 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 SLC15A1P46059 708 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 ANXA11P50995 505 aaKnown RBP8.19□□□□□ -1.1
LINC00558-201ENST00000569422 SMSP52788 366 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 SLC16A1P53985 500 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 SNRPGP62308 76 aaKnown RBP8.19□□□□□ -1.1
LINC00558-201ENST00000569422 RACK1P63244 317 aaKnown RBP8.19□□□□□ -1.1
LINC00558-201ENST00000569422 RGS1Q08116 209 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 FBXO42Q6P3S6 717 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 ASPGQ86U10 573 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 NRROSQ86YC3 692 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 GATAD2AQ86YP4 633 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 CELF2-AS1Q8N7Q2 184 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 MORN4Q8NDC4 146 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 TBC1D17Q9HA65 648 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 FBXO34Q9NWN3 711 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 ANKMY1Q9P2S6 941 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 CES1P1Q9UKY3 287 aa8.19□□□□□ -1.1
LINC00558-201ENST00000569422 PRICKLE3O43900 615 aaPredicted RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 NT5EP21589 574 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 SSTR4P31391 388 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 SOX18P35713 384 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 TRA2BP62995 288 aaKnown RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 C1orf61Q13536 156 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 RUNX2Q13950 521 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 INSL4Q14641 139 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 NCF4Q15080 339 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 DEFB110Q30KQ9 67 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 CRTC2Q53ET0 693 aaPredicted RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 MRM1Q6IN84 353 aaKnown RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 SLC27A4Q6P1M0 643 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ZNF704Q6ZNC4 412 aaPredicted RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 MFSD9Q8NBP5 474 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 SRFBP1Q8NEF9 429 aaKnown RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 BBS1Q8NFJ9 593 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ARL5BQ96KC2 179 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 TRNT1Q96Q11 434 aaKnown RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 MFRPQ9BY79 579 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 SLC28A3Q9HAS3 691 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ABCB9Q9NP78 766 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 KLHL28Q9NXS3 571 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 EMC3Q9P0I2 261 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 WDR45Q9Y484 360 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 A0A1W2PQF6 199 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ZC3H12DA2A288 527 aaKnown RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ARRDC5A6NEK1 342 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 TFECO14948 347 aaPredicted RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 AQP9O43315 295 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 CDC123O75794 336 aaPredicted RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 KCNK2O95069 426 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 RAB36O95755 333 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 HEXBP07686 556 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ALOX5P09917 674 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 PRG2P13727 222 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 IFNA8P32881 189 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 AHRP35869 848 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ABATP80404 500 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 HNRNPA0Q13151 305 aaKnown RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 EXOSC7Q15024 291 aaKnown RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 DUSP5Q16690 384 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 AADACL4Q5VUY2 407 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 TUBA3EQ6PEY2 450 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 PHC2Q8IXK0 858 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 NANOGP1Q8N7R0 232 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 SLC30A2Q9BRI3 323 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 TMED9Q9BVK6 235 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 PINK1Q9BXM7 581 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 TCEAL2Q9H3H9 227 aaPredicted RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 MED20Q9H944 212 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 CACYBPQ9HB71 228 aaKnown RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 TRPV4Q9HBA0 871 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 OBP2AQ9NY56 170 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 SLC7A7Q9UM01 511 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 NCKAP1Q9Y2A7 1128 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 CHST2Q9Y4C5 530 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 COL4A3Q01955 1670 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 OR2W5A6NFC9 320 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 GPR89AB7ZAQ6 455 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 GNB5O14775 395 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 GPR89BP0CG08 455 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 CFL1P23528 166 aaKnown RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 CRYBB2P43320 205 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 PPP1CAP62136 330 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 RPS25P62851 125 aaKnown RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ST3GAL3Q11203 375 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 HYAL1Q12794 435 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 GPR18Q14330 331 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 MLC1Q15049 377 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ZNF791Q3KP31 576 aaPredicted RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 C1orf94Q6P1W5 598 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms