RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 SH3GL2Q99962 352 aa9.4□□□□□ -0.9
LINC00564-201ENST00000567258 GPATCH1Q9BRR8 931 aaKnown RBP9.4□□□□□ -0.9
LINC00564-201ENST00000567258 YIPF4Q9BSR8 244 aa9.4□□□□□ -0.9
LINC00564-201ENST00000567258 RBM24Q9BX46 236 aaKnown RBP9.4□□□□□ -0.9
LINC00564-201ENST00000567258 KRTAP9-9Q9BYP9 154 aa9.4□□□□□ -0.9
LINC00564-201ENST00000567258 KRTAP9-4Q9BYQ2 154 aa9.4□□□□□ -0.9
LINC00564-201ENST00000567258 C12orf65Q9H3J6 166 aaKnown RBP9.4□□□□□ -0.9
LINC00564-201ENST00000567258 PIGMQ9H3S5 423 aa9.4□□□□□ -0.9
LINC00564-201ENST00000567258 DSN1Q9H410 356 aa9.4□□□□□ -0.9
LINC00564-201ENST00000567258 REEP4Q9H6H4 257 aa9.4□□□□□ -0.9
LINC00564-201ENST00000567258 EQTNQ9NQ60 294 aa9.4□□□□□ -0.9
LINC00564-201ENST00000567258 CRIM1Q9NZV1 1036 aa9.4□□□□□ -0.9
LINC00564-201ENST00000567258 FBXL2Q9UKC9 423 aa9.4□□□□□ -0.9
LINC00564-201ENST00000567258 TEP1Q99973 2627 aaKnown RBP9.4□□□□□ -0.9
LINC00564-201ENST00000567258 A6NNC1 897 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 KDM4EB2RXH2 506 aaPredicted RBP9.39□□□□□ -0.91
LINC00564-201ENST00000567258 UPK1AO00322 258 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 CTAG2O75638 210 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 RCBTB2O95199 551 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 IL33O95760 270 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 IFI6P09912 130 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 LINC00032P0C843 101 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 DNASE1P24855 282 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 HPCAL1P37235 193 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 GFRA1P56159 465 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 RPS3AP61247 264 aaKnown RBP9.39□□□□□ -0.91
LINC00564-201ENST00000567258 SORDQ00796 357 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 SLC18A2Q05940 514 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 C17orf67Q0P5P2 114 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 PCLAFQ15004 111 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 BCL2A1Q16548 175 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 LRIG3Q6UXM1 1119 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 SPNS3Q6ZMD2 512 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 SH2D5Q6ZV89 423 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 LUZP2Q86TE4 346 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 UBQLNLQ8IYU4 475 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 C9orf106Q8NAJ2 232 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 PLPP7Q8NBV4 271 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 LRRN4CLQ8ND94 238 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 CHDHQ8NE62 594 aaPredicted RBP9.39□□□□□ -0.91
LINC00564-201ENST00000567258 NUP43Q8NFH3 380 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00564-201ENST00000567258 DUSP19Q8WTR2 217 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 SLC9A6Q92581 669 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 NINJ1Q92982 152 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 NTNG2Q96CW9 530 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 EGLN2Q96KS0 407 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 TSSK3Q96PN8 268 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 PIGQQ9BRB3 760 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 FAM120CQ9NX05 1096 aaKnown RBP9.39□□□□□ -0.91
LINC00564-201ENST00000567258 NDRG3Q9UGV2 375 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 AKAP6Q13023 2319 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 CSMD1Q96PZ7 3565 aa9.39□□□□□ -0.91
LINC00564-201ENST00000567258 SLC22A20A6NK97 555 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 H3BML4 177 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 NPHS1O60500 1241 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 SMNDC1O75940 238 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINC00564-201ENST00000567258 GOSR1O95249 250 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 UTS2O95399 124 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 ZNF708P17019 499 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 DNAJA1P31689 397 aaKnown RBP9.38□□□□□ -0.91
LINC00564-201ENST00000567258 LHX2P50458 406 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 PRR5P85299 388 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 SGCBQ16585 318 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 ATP6AP1LQ52LC2 224 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 ANKRD26P1Q6NSI1 321 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 PPP4R4Q6NUP7 873 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 ZNF551Q7Z340 670 aaPredicted RBP9.38□□□□□ -0.91
LINC00564-201ENST00000567258 GCNT2Q8N0V5 402 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 CNEP1R1Q8N9A8 125 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 CDRT4Q8N9R6 151 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 OR2M3Q8NG83 312 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 PPP1R14CQ8TAE6 165 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 TWIST2Q8WVJ9 160 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 JADE3Q92613 823 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 MTERF3Q96E29 417 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 ZNF764Q96H86 408 aaPredicted RBP9.38□□□□□ -0.91
LINC00564-201ENST00000567258 PPP3R2Q96LZ3 170 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 FAM111AQ96PZ2 611 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 UCN2Q96RP3 112 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 PRPF18Q99633 342 aaKnown RBP9.38□□□□□ -0.91
LINC00564-201ENST00000567258 LMF2Q9BU23 707 aaKnown RBP9.38□□□□□ -0.91
LINC00564-201ENST00000567258 GATA5Q9BWX5 397 aaPredicted RBP9.38□□□□□ -0.91
LINC00564-201ENST00000567258 PRRG4Q9BZD6 226 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 ROPN1BQ9BZX4 212 aaPredicted RBP9.38□□□□□ -0.91
LINC00564-201ENST00000567258 L2HGDHQ9H9P8 463 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 ROPN1Q9HAT0 212 aaPredicted RBP9.38□□□□□ -0.91
LINC00564-201ENST00000567258 RASSF1Q9NS23 344 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 ACSS1Q9NUB1 689 aaPredicted RBP9.38□□□□□ -0.91
LINC00564-201ENST00000567258 ATAD3AQ9NVI7 634 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 MKS1Q9NXB0 559 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 MED11Q9P086 117 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 PACSIN3Q9UKS6 424 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 TRAF6Q9Y4K3 522 aa9.38□□□□□ -0.91
LINC00564-201ENST00000567258 NPIPB8E9PQR5 432 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 SEC14L5O43304 696 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 EMC8O43402 210 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 NDUFB5O43674 189 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 GMFGO60234 142 aa9.37□□□□□ -0.91
LINC00564-201ENST00000567258 FADS1O60427 444 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms