RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 STX5Q13190 355 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 PON3Q15166 354 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 GUSBP1Q15486 140 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 ACKR1Q16570 336 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 SGCBQ16585 318 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 RNF165Q6ZSG1 346 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 FAM214BQ7L5A3 538 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 CDRT4Q8N9R6 151 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 ZNF610Q8N9Z0 462 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 FNDC9Q8TBE3 224 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 CAVIN3Q969G5 261 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 MED18Q9BUE0 208 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 OPN3Q9H1Y3 402 aaPredicted RBP13.49□□□□□ -0.25
RNF40-209ENST00000566703 PPCSQ9HAB8 311 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 KLHL28Q9NXS3 571 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 C6orf203Q9P0P8 240 aaPredicted RBP13.49□□□□□ -0.25
RNF40-209ENST00000566703 TBK1Q9UHD2 729 aa13.49□□□□□ -0.25
RNF40-209ENST00000566703 ALG1L2C9J202 215 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 H0YC42 278 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 H3BML4 177 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 SEC14L5O43304 696 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 RGS14O43566 566 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 PLIN3O60664 434 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 SMPD2O60906 423 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 FAM153BP0C7A2 387 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 CPA3P15088 417 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 PPP3CBP16298 524 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 ZNF17P17021 662 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 ADSLP30566 484 aaPredicted RBP13.48□□□□□ -0.25
RNF40-209ENST00000566703 TPD52P55327 224 aaPredicted RBP13.48□□□□□ -0.25
RNF40-209ENST00000566703 FAM153CQ494X1 144 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 ZCCHC12Q6PEW1 402 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 APOOLQ6UXV4 268 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 ZNF551Q7Z340 670 aaPredicted RBP13.48□□□□□ -0.25
RNF40-209ENST00000566703 TDRPQ86YL5 185 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 P3H2Q8IVL5 708 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 EIF1ADQ8N9N8 165 aaKnown RBP13.48□□□□□ -0.25
RNF40-209ENST00000566703 ZFP28Q8NHY6 868 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 KIF18AQ8NI77 898 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 FAM110BQ8TC76 370 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 GPR151Q8TDV0 419 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 ACTRT2Q8TDY3 377 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 EGLN2Q96KS0 407 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 FCRL1Q96LA6 429 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 LRTM1Q9HBL6 345 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 PLSCR4Q9NRQ2 329 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 OXSMQ9NWU1 459 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 C1orf109Q9NX04 203 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 PROCRQ9UNN8 238 aa13.48□□□□□ -0.25
RNF40-209ENST00000566703 GXYLT2A0PJZ3 443 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 C7orf72A4D263 438 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 PDPK1O15530 556 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 SIAH2O43255 324 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 IGKV1D-16P01601 117 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 GPC1P35052 558 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 FRKP42685 505 aaPredicted RBP13.47□□□□□ -0.25
RNF40-209ENST00000566703 KCNJ5P48544 419 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 SIRPAP78324 504 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 LTBQ06643 244 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 GRAMD1BQ3KR37 738 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 C20orf204Q6ZNR8 217 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 GGNQ86UU5 652 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 WDR75Q8IWA0 830 aaKnown RBP13.47□□□□□ -0.25
RNF40-209ENST00000566703 OR5M1Q8NGP8 315 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 OR6Y1Q8NGX8 325 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 OR6K3Q8NGY3 331 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 ZBED6CLQ96FA7 236 aaPredicted RBP13.47□□□□□ -0.25
RNF40-209ENST00000566703 PIK3IP1Q96FE7 263 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 MARK4Q96L34 752 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 CCT7Q99832 543 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 TRMOQ9BU70 441 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 REEP4Q9H6H4 257 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 FANCFQ9NPI8 374 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 GLRX2Q9NS18 164 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 ACSS1Q9NUB1 689 aaPredicted RBP13.47□□□□□ -0.25
RNF40-209ENST00000566703 MID2Q9UJV3 735 aa13.47□□□□□ -0.25
RNF40-209ENST00000566703 NDUFB5O43674 189 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 HSPA4LO95757 839 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 NEFHP12036 1026 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 DDX5P17844 614 aaKnown RBP13.46□□□□□ -0.25
RNF40-209ENST00000566703 RFX3P48380 749 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 MANFP55145 182 aaKnown RBP13.46□□□□□ -0.25
RNF40-209ENST00000566703 RAC1P63000 192 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 HSPB3Q12988 150 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.46□□□□□ -0.25
RNF40-209ENST00000566703 CPTPQ5TA50 214 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 LIPMQ5VYY2 423 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 Q6ZSR9 355 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 MISPQ8IVT2 679 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 GTPBP8Q8N3Z3 284 aaPredicted RBP13.46□□□□□ -0.25
RNF40-209ENST00000566703 NUP43Q8NFH3 380 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 OR4C3Q8NH37 302 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 PIK3R3Q92569 461 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 ZBTB8AQ96BR9 441 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 PPCDCQ96CD2 204 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 MTERF3Q96E29 417 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 GMPPAQ96IJ6 420 aaPredicted RBP13.46□□□□□ -0.25
RNF40-209ENST00000566703 BDH2Q9BUT1 245 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 PRRG4Q9BZD6 226 aa13.46□□□□□ -0.25
RNF40-209ENST00000566703 ZNF395Q9H8N7 513 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms