RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 CDHR4A6H8M9 788 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 KHNYNO15037 678 aaKnown RBP10.5□□□□□ -0.73
LINC00562-201ENST00000566385 IGKV3-11P04433 115 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 MMP11P24347 488 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 RYKP34925 604 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 CLDN6P56747 220 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 PTGES3Q15185 160 aaKnown RBP10.5□□□□□ -0.73
LINC00562-201ENST00000566385 SF3A2Q15428 464 aaKnown RBP10.5□□□□□ -0.73
LINC00562-201ENST00000566385 BMP8AQ7Z5Y6 402 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 ENTHD1Q8IYW4 607 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 BPIFB6Q8NFQ5 453 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 OR4K5Q8NGD3 323 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 SLC2A12Q8TD20 617 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 ZNF721Q8TF20 911 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 EFHD2Q96C19 240 aaPredicted RBP10.5□□□□□ -0.73
LINC00562-201ENST00000566385 PSD2Q9BQI7 771 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 FLRT3Q9NZU0 649 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 REV1Q9UBZ9 1251 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 POFUT2Q9Y2G5 429 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 MMACHCQ9Y4U1 282 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 KMT2EQ8IZD2 1858 aa10.5□□□□□ -0.73
LINC00562-201ENST00000566385 CNOT3O75175 753 aaKnown RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 CYP7B1O75881 506 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 DBIP07108 87 aaKnown RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 THBS1P07996 1170 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 HTR1AP08908 422 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 ZGLP1P0C6A0 271 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 CCNYL3P0C7X3 344 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 ZNF28P17035 718 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 CDH2P19022 906 aaPredicted RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 CHMP24386 653 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 HTR2AP28223 471 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 RPL5P46777 297 aaKnown RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 NKAIN1Q4KMZ8 207 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 PLA2G2CQ5R387 149 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 DBX2Q6ZNG2 339 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 BCORP1Q8N888 145 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 FBLIM1Q8WUP2 373 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 APH1BQ8WW43 257 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 CNOT9Q92600 299 aaKnown RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 PITX2Q99697 317 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 NUDT9Q9BW91 350 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 NXF5Q9H1B4 397 aaKnown RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 LIN28AQ9H9Z2 209 aaKnown RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 ZNF556Q9HAH1 456 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 C11orf16Q9NQ32 467 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 KLHL28Q9NXS3 571 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 CBLCQ9ULV8 474 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 SRPK3Q9UPE1 567 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 OR10H1Q9Y4A9 318 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 EFCAB7A8K855 629 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 PTGES3LE9PB15 166 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 SLC1A7O00341 560 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 FAAHO00519 579 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 CDX4O14627 284 aaPredicted RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 WBP4O75554 376 aaKnown RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 TP53P04637 393 aaPredicted RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 EEF1B2P24534 225 aaKnown RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 POU1F1P28069 291 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 IDH2P48735 452 aaKnown RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 NDUFAF6Q330K2 333 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 CCDC157Q569K6 752 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 ZNF385CQ66K41 422 aaPredicted RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 FAM199XQ6PEV8 388 aaPredicted RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 PPP1R3BQ86XI6 285 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 TMEM255BQ8WV15 326 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 Q9N2J8 555 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 MKKSQ9NPJ1 570 aaPredicted RBP10.49□□□□□ -0.73
LINC00562-201ENST00000566385 RNF6Q9Y252 685 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 ZNF318Q5VUA4 2279 aa10.49□□□□□ -0.73
LINC00562-201ENST00000566385 COL27A1Q8IZC6 1860 aaPredicted RBP10.48□□□□□ -0.73
LINC00562-201ENST00000566385 TEX51A0A1B0GUA7 166 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 ARRDC5A6NEK1 342 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 AP3D1O14617 1153 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 LDOC1O95751 146 aaPredicted RBP10.48□□□□□ -0.73
LINC00562-201ENST00000566385 GALNSP34059 522 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 GRK6P43250 576 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 ZFP36L1Q07352 338 aaKnown RBP10.48□□□□□ -0.73
LINC00562-201ENST00000566385 MAD2L1BPQ15013 274 aaPredicted RBP10.48□□□□□ -0.73
LINC00562-201ENST00000566385 ELAVL1Q15717 326 aaKnown RBP10.48□□□□□ -0.73
LINC00562-201ENST00000566385 YOD1Q5VVQ6 348 aaPredicted RBP10.48□□□□□ -0.73
LINC00562-201ENST00000566385 AP1ARQ63HQ0 302 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 WDR88Q6ZMY6 472 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 PRICKLE2Q7Z3G6 844 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 GDF7Q7Z4P5 450 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 CCDC103Q8IW40 242 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 C9orf40Q8IXQ3 194 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 PRR22Q8IZ63 422 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 BMPERQ8N8U9 685 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 FAM81AQ8TBF8 368 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 HDAC2Q92769 488 aaKnown RBP10.48□□□□□ -0.73
LINC00562-201ENST00000566385 AMBNQ9NP70 447 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 CNIH4Q9P003 139 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 SLC7A7Q9UM01 511 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 EP300Q09472 2414 aaPredicted RBP10.48□□□□□ -0.73
LINC00562-201ENST00000566385 TRIM64CA6NLI5 447 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 IDSB3KWA1 339 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 ANGPTL1O95841 491 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 AK1P00568 194 aa10.48□□□□□ -0.73
LINC00562-201ENST00000566385 CSTF2P33240 577 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms