RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 MTORP42345 2549 aa18.22■□□□□ 0.51
CLN6-207ENST00000566347 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 OR2M5A3KFT3 312 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 TMEM114B3SHH9 223 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 TNFSF13O75888 250 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 ANGPTL1O95841 491 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 CHRNGP07510 517 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 MAPK1P28482 360 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 SERPINB5P36952 375 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 PRKAG1P54619 331 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 GRAMD1BQ3KR37 738 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 ZCCHC12Q6PEW1 402 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 SZRD1Q7Z422 152 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 CLHC1Q8NHS4 586 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 SLC9A6Q92581 669 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 PPP3R2Q96LZ3 170 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 YIPF4Q9BSR8 244 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 ROPN1BQ9BZX4 212 aaPredicted RBP18.21■□□□□ 0.51
CLN6-207ENST00000566347 LIME1Q9H400 295 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 ROPN1Q9HAT0 212 aaPredicted RBP18.21■□□□□ 0.51
CLN6-207ENST00000566347 STOML1Q9UBI4 398 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 ZNF337Q9Y3M9 751 aa18.21■□□□□ 0.51
CLN6-207ENST00000566347 PCNX3Q9H6A9 2034 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 A8MXE2 369 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 TMEM233B4DJY2 109 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 MSTNO14793 375 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 PIP5K1BO14986 540 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 EMC8O43402 210 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 TNFRSF21O75509 655 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 IGKV1D-16P01601 117 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 NGFRP08138 427 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 BCKDHAP12694 445 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 HPCAL1P37235 193 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 RPL3P39023 403 aaKnown RBP18.2■□□□□ 0.5
CLN6-207ENST00000566347 OCRLQ01968 901 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 UGT3A2Q3SY77 523 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 OR6Y1Q8NGX8 325 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 GIMAP5Q96F15 307 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 MECRQ9BV79 373 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 SLC17A7Q9P2U7 560 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 ZNF175Q9Y473 711 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 AP4B1Q9Y6B7 739 aa18.2■□□□□ 0.5
CLN6-207ENST00000566347 SETD2Q9BYW2 2564 aaPredicted RBP18.19■□□□□ 0.5
CLN6-207ENST00000566347 SH3D21A4FU49 640 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 ALG1L2C9J202 215 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 H3BML4 177 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 SEC14L5O43304 696 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 LCN1P31025 176 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 PCYT1AP49585 367 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 CLDN15P56746 228 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 RPS3AP61247 264 aaKnown RBP18.19■□□□□ 0.5
CLN6-207ENST00000566347 VSNL1P62760 191 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 FGFBP1Q14512 234 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 MLC1Q15049 377 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.19■□□□□ 0.5
CLN6-207ENST00000566347 MFSD12Q6NUT3 480 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 PAMR1Q6UXH9 720 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 APOOLQ6UXV4 268 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 CAMKMTQ7Z624 323 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 EXOC3L1Q86VI1 746 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 CNEP1R1Q8N9A8 125 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 TCP10LQ8TDR4 215 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 PINK1Q9BXM7 581 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 NDRG3Q9UGV2 375 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 ATP6V1HQ9UI12 483 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 PLEKHA6Q9Y2H5 1048 aa18.19■□□□□ 0.5
CLN6-207ENST00000566347 PRRC2AP48634 2157 aaKnown RBP18.18■□□□□ 0.5
CLN6-207ENST00000566347 A0A087WZY1 265 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 SCAMP2O15127 329 aaKnown RBP18.18■□□□□ 0.5
CLN6-207ENST00000566347 NDUFB5O43674 189 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 SPAG7O75391 227 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 OXSR1O95747 527 aaPredicted RBP18.18■□□□□ 0.5
CLN6-207ENST00000566347 HSPA4LO95757 839 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 ALOX5P09917 674 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 ACP2P11117 423 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 ZNF17P17021 662 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 TBXA2RP21731 343 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 CPOXP36551 454 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 SERPINB4P48594 390 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 PRIM2P49643 509 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 SUCLG1P53597 346 aaKnown RBP18.18■□□□□ 0.5
CLN6-207ENST00000566347 XKR7Q5GH72 579 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 EMBQ6PCB8 327 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 SLC16A11Q8NCK7 471 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 OR5M1Q8NGP8 315 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 FAM110BQ8TC76 370 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 FIG4Q92562 907 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 MBD6Q96DN6 1003 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 STARD4Q96DR4 205 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 ALPK1Q96QP1 1244 aa18.18■□□□□ 0.5
CLN6-207ENST00000566347 CASKO14936 926 aa18.17■□□□□ 0.5
CLN6-207ENST00000566347 SMNDC1O75940 238 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLN6-207ENST00000566347 KCNK2O95069 426 aa18.17■□□□□ 0.5
CLN6-207ENST00000566347 RAF1P04049 648 aa18.17■□□□□ 0.5
CLN6-207ENST00000566347 FCGR2AP12318 317 aa18.17■□□□□ 0.5
CLN6-207ENST00000566347 HPGDP15428 266 aa18.17■□□□□ 0.5
CLN6-207ENST00000566347 CLDN20P56880 219 aa18.17■□□□□ 0.5
CLN6-207ENST00000566347 DUSP5Q16690 384 aa18.17■□□□□ 0.5
CLN6-207ENST00000566347 TMEM44Q2T9K0 475 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms