RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 STX16-NPEPL1H3BU86 382 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 H7C417 338 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 RTCAO00442 366 aaKnown RBP8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 STX16O14662 325 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 ACOX3O15254 700 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 SEC14L5O43304 696 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 ATP8B1O43520 1251 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 AQP8O94778 261 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 WDR47O94967 919 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 MTHFD2P13995 350 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 EPB42P16452 691 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 PCMT1P22061 227 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 GDF5P43026 501 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 CDH11P55287 796 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 TPD52P55327 224 aaPredicted RBP8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 B3GALT5-AS1P59052 145 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 IRF9Q00978 393 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 CHRNB3Q05901 458 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 PLCXD2Q0VAA5 305 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 TAB1Q15750 504 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 PAGE2BQ5JRK9 111 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 SFRP5Q5T4F7 317 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 C6orf163Q5TEZ5 329 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 C18orf63Q68DL7 685 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 DESI1Q6ICB0 168 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 OR5M10Q6IEU7 315 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 PPP4R4Q6NUP7 873 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 FIGNL1Q6PIW4 674 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 SSX8Q7RTT4 187 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 SPATA6LQ8N4H0 392 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 TMEM151AQ8N4L1 468 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 OR4K17Q8NGC6 315 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 UBTD2Q8WUN7 234 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 HTRA1Q92743 480 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 RGMAQ96B86 450 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 C3orf49Q96BT1 292 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 OMA1Q96E52 524 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 DHRS9Q9BPW9 319 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 PIMREGQ9BSJ6 248 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF747Q9BV97 191 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 RBM4Q9BWF3 364 aaKnown RBP8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 CD244Q9BZW8 370 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 NXF5Q9H1B4 397 aaKnown RBP8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 WDR41Q9HAD4 459 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 FOLH1BQ9HBA9 442 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 FBXO34Q9NWN3 711 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 CLEC4AQ9UMR7 237 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 PLLPQ9Y342 182 aa8.05□□□□□ -1.12
VPS9D1-205ENST00000565452 MALRD1Q5VYJ5 2156 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 VWC2LB2RUY7 222 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 SHISA9B4DS77 424 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 SUPT3HB4E1H0 165 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 H3BQF6 201 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 GOLGA8RI6L899 631 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 K7EPI3 171 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 TM9SF1O15321 606 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 TAPBPO15533 448 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 UGDHO60701 494 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 SS18L1O75177 396 aaPredicted RBP8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 UGT2B11O75310 529 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 SUPT3HO75486 399 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 ALX3O95076 343 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 TGFB1P01137 390 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 GFAPP14136 432 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 HK1P19367 917 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 ATP5F1P24539 256 aaPredicted RBP8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 CASP2P42575 452 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 SLC18A1P54219 525 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 PRKAA2P54646 552 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 TNFRSF17Q02223 184 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 AGBL2Q5U5Z8 902 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 RAET1LQ5VY80 246 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 C11orf71Q6IPW1 123 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 UGT2A3Q6UWM9 527 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 LRRC70Q7Z2Q7 622 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 PEG10Q86TG7 708 aaKnown RBP8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 GALNT12Q8IXK2 581 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 ZNF619Q8N2I2 560 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 MUC15Q8N387 334 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 METTL25Q8N6Q8 603 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 GOLGA6L1Q8N7Z2 621 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 SEMA6DQ8NFY4 1073 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 UBE2E3Q969T4 207 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 MUCL1Q96DR8 90 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 PTCD3Q96EY7 689 aaKnown RBP8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 CMTM7Q96FZ5 175 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 APOPT1Q96IL0 206 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 COL21A1Q96P44 957 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 CENPKQ9BS16 269 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 EFCAB11Q9BUY7 163 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 C1QTNF3Q9BXJ4 246 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 TMBIM4Q9HC24 238 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 PAQR5Q9NXK6 330 aaPredicted RBP8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 TMEM216Q9P0N5 145 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 XPR1Q9UBH6 696 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 OPTCQ9UBM4 332 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 IKZF3Q9UKT9 509 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 AP4B1Q9Y6B7 739 aa8.04□□□□□ -1.12
VPS9D1-205ENST00000565452 NCF1BA6NI72 391 aaPredicted RBP8.03□□□□□ -1.12
VPS9D1-205ENST00000565452 OR6C70A6NIJ9 312 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms