RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 SERPINA11Q86U17 422 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 ZNF227Q86WZ6 799 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 FBXW8Q8N3Y1 598 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 OR10G3Q8NGC4 313 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 RAB8BQ92930 207 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 SDF2Q99470 211 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 GPATCH1Q9BRR8 931 aaKnown RBP23.78■■□□□ 1.4
NME3-208ENST00000565379 A4GALTQ9NPC4 353 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 ABCG2Q9UNQ0 655 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 CHCHD2Q9Y6H1 151 aaPredicted RBP23.78■■□□□ 1.4
NME3-208ENST00000565379 KCNE3Q9Y6H6 103 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 CENPEQ02224 2701 aa23.78■■□□□ 1.4
NME3-208ENST00000565379 CCT8L1PA6NM43 557 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 TNFRSF21O75509 655 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 NGFRP08138 427 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 CLK3P49761 638 aaKnown RBP23.77■■□□□ 1.4
NME3-208ENST00000565379 MTPNP58546 118 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 INAQ16352 499 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 GCNT6Q5T4J0 391 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 RPUSD3Q6P087 351 aaKnown RBP23.77■■□□□ 1.4
NME3-208ENST00000565379 FIGNL1Q6PIW4 674 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 FAR1Q8WVX9 515 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 ZNF350Q9GZX5 532 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 TMEM38AQ9H6F2 299 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 KAT8Q9H7Z6 458 aaKnown RBP23.77■■□□□ 1.4
NME3-208ENST00000565379 AGPAT4Q9NRZ5 378 aa23.77■■□□□ 1.4
NME3-208ENST00000565379 WIPF3A6NGB9 483 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 KLRC4-KLRK1H3BQV0 150 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 NME2P1O60361 137 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 C1QCP02747 245 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 NR2F1P10589 423 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 CYP4B1P13584 511 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 NME2P22392 152 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 SLC6A2P23975 617 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 RFX3P48380 749 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 RBBP4Q09028 425 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 PRAMEF8Q5VWM4 474 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 PRAMEF7Q5VXH5 474 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 C8orf82Q6P1X6 216 aaPredicted RBP23.76■■□□□ 1.39
NME3-208ENST00000565379 LRRC74BQ6ZQY2 392 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 MDGA2Q7Z553 956 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 FAM98AQ8NCA5 519 aaKnown RBP23.76■■□□□ 1.39
NME3-208ENST00000565379 ST6GALNAC3Q8NDV1 305 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 OR5M3Q8NGP4 307 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 ECSITQ9BQ95 431 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 IKZF5Q9H5V7 419 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 UBQLN4Q9NRR5 601 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 L3MBTL1Q9Y468 752 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 CACNA1DQ01668 2161 aa23.76■■□□□ 1.39
NME3-208ENST00000565379 SNX4O95219 450 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 LDLRP01130 860 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 IGKV1D-16P01601 117 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 TFPTP0C1Z6 253 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 CNR1P21554 472 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 CRISP3P54108 245 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 ZNF630Q2M218 657 aaPredicted RBP23.75■■□□□ 1.39
NME3-208ENST00000565379 GPAT3Q53EU6 434 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 CCNJQ5T5M9 372 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 SLC30A6Q6NXT4 461 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 C16orf89Q6UX73 402 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 SLC30A8Q8IWU4 369 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 ZNF527Q8NB42 609 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 RNF138Q8WVD3 245 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 SLC39A3Q9BRY0 314 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 SAP130Q9H0E3 1048 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 METTL7AQ9H8H3 244 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 CNOT11Q9UKZ1 510 aaKnown RBP23.75■■□□□ 1.39
NME3-208ENST00000565379 WDR45Q9Y484 360 aa23.75■■□□□ 1.39
NME3-208ENST00000565379 WISP2O76076 250 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 UTS2O95399 124 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 CCL3P10147 92 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 TBXA2RP21731 343 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 CASP3P42574 277 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 CPA2P48052 419 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 MXRA7P84157 204 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 PMP22Q01453 160 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 CYP51A1Q16850 503 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 FLYWCH1Q4VC44 716 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 NET1Q7Z628 596 aaPredicted RBP23.74■■□□□ 1.39
NME3-208ENST00000565379 NODALQ96S42 347 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 SLX1AQ9BQ83 275 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 ANGPTL4Q9BY76 406 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 OSGIN2Q9Y236 505 aa23.74■■□□□ 1.39
NME3-208ENST00000565379 PRAMEF25A6NGN4 478 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 C5orf58C9J3I9 102 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 DNAJA2O60884 412 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 ARAFP10398 606 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 HPGDP15428 266 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 ENDOUP21128 410 aaKnown RBP23.73■■□□□ 1.39
NME3-208ENST00000565379 EVI2BP34910 448 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 ATP12AP54707 1039 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 PSME3P61289 254 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 FUT5Q11128 374 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 ELOAQ14241 798 aaKnown RBP23.73■■□□□ 1.39
NME3-208ENST00000565379 SELPLGQ14242 412 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 ZNF324BQ6AW86 544 aaPredicted RBP23.73■■□□□ 1.39
NME3-208ENST00000565379 FAM180AQ6UWF9 173 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 MAMDC2Q7Z304 686 aaPredicted RBP23.73■■□□□ 1.39
NME3-208ENST00000565379 PGAM4Q8N0Y7 254 aa23.73■■□□□ 1.39
NME3-208ENST00000565379 POGLUT1Q8NBL1 392 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms