RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 OR2B2Q9GZK3 357 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 WDR55Q9H6Y2 383 aaPredicted RBP12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 C3orf14Q9HBI5 128 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 MRTO4Q9UKD2 239 aaKnown RBP12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 USH1CQ9Y6N9 552 aa12.38□□□□□ -0.43
VPS9D1-204ENST00000565023 PDZD2O15018 2839 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 A0A1W2PRB8 838 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 B4DXG7 233 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 FAM47E-STBD1D6RA91 191 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 ANKRD28O15084 1053 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 EMC8O43402 210 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 UTS2O95399 124 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 TGDSO95455 350 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 IL33O95760 270 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 ACTL6AO96019 429 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 IL2RAP01589 272 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 IGKV1D-16P01601 117 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 ALDOCP09972 364 aaKnown RBP12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 LAMP1P11279 417 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 HK1P19367 917 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 SSTR2P30874 369 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 UQCRC1P31930 480 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 CLK3P49761 638 aaKnown RBP12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 DGKQP52824 942 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 GAS1P54826 345 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 MYBPHQ13203 477 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 GRAMD1BQ3KR37 738 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 SPDYE7PQ495Y7 208 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 SLC9B1Q4ZJI4 515 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 RAET1LQ5VY80 246 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 ENPP6Q6UWR7 440 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 SPATA19Q7Z5L4 167 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 CAMKMTQ7Z624 323 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 LACC1Q8IV20 430 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 UBQLNLQ8IYU4 475 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 ARFGAP2Q8N6H7 521 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 GATSQ8NAP1 163 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 RELL2Q8NC24 303 aaPredicted RBP12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 CEP70Q8NHQ1 597 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 ACTRT2Q8TDY3 377 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 COQ8BQ96D53 544 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 TUBA1CQ9BQE3 449 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 TBL1XR1Q9BZK7 514 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 RTN4RQ9BZR6 473 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 ACSS1Q9NUB1 689 aaPredicted RBP12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 ZCCHC3Q9NUD5 404 aaKnown RBP12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 ITGB1BP2Q9UKP3 347 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 PCDHGB3Q9Y5G1 929 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 AKAP9Q99996 3911 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 MED12LQ86YW9 2145 aa12.37□□□□□ -0.43
VPS9D1-204ENST00000565023 GOLGA8QA0A0J9YX86 632 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 GOLGA8OA6NCC3 632 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 GOLGA8NF8WBI6 632 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 DVL2O14641 736 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 CFLARO15519 480 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 FADS1O60427 444 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 C6orf47O95873 294 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 SOAT1P35610 550 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 RNF144AP50876 292 aaPredicted RBP12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 PSMD4P55036 377 aaKnown RBP12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 PSPHP78330 225 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 TP53BP2Q13625 1128 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 LASP1Q14847 261 aaKnown RBP12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 MLC1Q15049 377 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 SF3B4Q15427 424 aaKnown RBP eCLIP12.36□□□□□ -0.438e-7■■■■□ 24.2
VPS9D1-204ENST00000565023 DUSP5Q16690 384 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 PGS1Q32NB8 556 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 SLC25A35Q3KQZ1 300 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 NHSL2Q5HYW2 709 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 CCNJQ5T5M9 372 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 CPTPQ5TA50 214 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 NSUN5P2Q63ZY6 315 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 EPGNQ6UW88 154 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 NATD1Q8N6N6 113 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 COX18Q8N8Q8 333 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 CDRT4Q8N9R6 151 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 C9orf106Q8NAJ2 232 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 SLC16A11Q8NCK7 471 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 OR2M3Q8NG83 312 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 DUSP19Q8WTR2 217 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 SMPDL3BQ92485 455 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 FAM120BQ96EK7 910 aaKnown RBP12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 MS4A4EQ96PG1 132 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 OR52B2Q96RD2 323 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 PRPF18Q99633 342 aaKnown RBP12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 SDHAF3Q9NRP4 125 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 SIRT3Q9NTG7 399 aaPredicted RBP12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 ATAD3AQ9NVI7 634 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 AIG1Q9NVV5 245 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 FBXO34Q9NWN3 711 aa12.36□□□□□ -0.43
VPS9D1-204ENST00000565023 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.35□□□□□ -0.43
VPS9D1-204ENST00000565023 CLCA1A8K7I4 914 aa12.35□□□□□ -0.43
VPS9D1-204ENST00000565023 SHISA8B8ZZ34 492 aa12.35□□□□□ -0.43
VPS9D1-204ENST00000565023 EEF1E1-BLOC1S5C9J1V9 151 aa12.35□□□□□ -0.43
VPS9D1-204ENST00000565023 SEC14L5O43304 696 aa12.35□□□□□ -0.43
VPS9D1-204ENST00000565023 EEF1E1O43324 174 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-204ENST00000565023 ZIC3O60481 467 aa12.35□□□□□ -0.43
VPS9D1-204ENST00000565023 DIAPH2O60879 1101 aa12.35□□□□□ -0.43
VPS9D1-204ENST00000565023 NKX2-2O95096 273 aa12.35□□□□□ -0.43
VPS9D1-204ENST00000565023 ANGPTL1O95841 491 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms