RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 HSPB2Q16082 182 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 OR4F3Q6IEY1 312 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 CDC73Q6P1J9 531 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 LACC1Q8IV20 430 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 FADS6Q8N9I5 356 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 VPS37AQ8NEZ2 397 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 FAM110BQ8TC76 370 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 SFXN5Q8TD22 340 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 ADAMTS15Q8TE58 950 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 SFXN2Q96NB2 322 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 TRIB1Q96RU8 372 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 BTBD2Q9BX70 525 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 ACTRT3Q9BYD9 372 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 RTN4RQ9BZR6 473 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 PIGUQ9H490 435 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 HHATLQ9HCP6 504 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 DUSP22Q9NRW4 184 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 MARCOQ9UEW3 520 aaPredicted RBP16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 RPH3AQ9Y2J0 694 aaPredicted RBP16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 FBN2P35556 2912 aa16.66■□□□□ 0.26
SYNGR3-204ENST00000564642 C17orf51A8MQB3 221 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 SDHDO14521 159 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 ZIC3O60481 467 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 TOXO94900 526 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 CPN1P15169 458 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 HK1P19367 917 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 CHMP24386 653 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 LCN1P31025 176 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 TIMP3P35625 211 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 STARP49675 285 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 CLNS1AP54105 237 aaKnown RBP16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 GFRA1P56159 465 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 GANABQ14697 944 aaKnown RBP16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 CCNJQ5T5M9 372 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 ANXA8L1Q5VT79 327 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 NSUN5P2Q63ZY6 315 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 OGFOD2Q6N063 350 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 SPATA19Q7Z5L4 167 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 WDR75Q8IWA0 830 aaKnown RBP16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 MCEMP1Q8IX19 187 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 OR8J2Q8NGG1 315 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 OR4C3Q8NH37 302 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 OR5AK3PQ8NH89 298 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 ZPLD1Q8TCW7 415 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 CDS1Q92903 461 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 ARL8AQ96BM9 186 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 CALHM2Q9HA72 323 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 UBQLN4Q9NRR5 601 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 ARGLU1Q9NWB6 273 aaPredicted RBP16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 PCNX3Q9H6A9 2034 aa16.65■□□□□ 0.26
SYNGR3-204ENST00000564642 GOLGA8QA0A0J9YX86 632 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 GOLGA8OA6NCC3 632 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 GOLGA8NF8WBI6 632 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 H0Y3Z8 333 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 RNASET2O00584 256 aaKnown RBP16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 NDUFB5O43674 189 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 OXSR1O95747 527 aaPredicted RBP16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 ATP6V1C1P21283 382 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 TBXA2RP21731 343 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 RIPPLY3P57055 190 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 DPY19L1Q2PZI1 675 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 EXOSC6Q5RKV6 272 aaKnown RBP16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 APOOLQ6UXV4 268 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 SEM1Q6ZVN7 128 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 CLECL1Q8IZS7 167 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 TNIP2Q8NFZ5 429 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 OR4A15Q8NGL6 344 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 SPOCK3Q9BQ16 436 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 WDR55Q9H6Y2 383 aaPredicted RBP16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 GPATCH2Q9NW75 528 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 FBXO34Q9NWN3 711 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 C2CD3Q4AC94 2353 aa16.64■□□□□ 0.25
SYNGR3-204ENST00000564642 PRSS51A0A1B0GVH4 220 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 CD8B2A6NJW9 211 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 KDM4EB2RXH2 506 aaPredicted RBP16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 B4DXG7 233 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 ALG1L2C9J202 215 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 SCDO00767 359 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 GMFGO60234 142 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 NGFRP08138 427 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 PRF1P14222 555 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 EPHA3P29320 983 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 CEACAM8P31997 349 aaPredicted RBP16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 WNT3P56703 355 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 OCRLQ01968 901 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 SLC25A35Q3KQZ1 300 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 RAET1LQ5VY80 246 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 NXNQ6DKJ4 435 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 MEX3BQ6ZN04 569 aaKnown RBP16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 HDXQ7Z353 690 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 LIX1LQ8IVB5 337 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 GOLGA6L1Q8N7Z2 621 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 ZNF75CPQ92670 426 aaPredicted RBP16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 TESCQ96BS2 214 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 C1GALT1C1Q96EU7 318 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 ATP6V1G3Q96LB4 118 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 ENKD1Q9H0I2 346 aa16.63■□□□□ 0.25
SYNGR3-204ENST00000564642 DUXAA6NLW8 204 aa16.62■□□□□ 0.25
SYNGR3-204ENST00000564642 DVL2O14641 736 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms