RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SLC39A3Q9BRY0 314 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 PAQR5Q9NXK6 330 aaPredicted RBP13.54□□□□□ -0.24
SPG7-210ENST00000564409 ELOVL5Q9NYP7 299 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 SH3BP4Q9P0V3 963 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 ZNF337Q9Y3M9 751 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 DNAJC15Q9Y5T4 150 aa13.54□□□□□ -0.24
SPG7-210ENST00000564409 NUP214P35658 2090 aaPredicted RBP13.54□□□□□ -0.24
SPG7-210ENST00000564409 LSM1O15116 133 aaKnown RBP13.53□□□□□ -0.24
SPG7-210ENST00000564409 EMC8O43402 210 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 ANGPTL1O95841 491 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 NUDT17P0C025 328 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 LINC00032P0C843 101 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 FOSL1P15407 271 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 ZNF17P17021 662 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 TBXA2RP21731 343 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 SERPINB4P48594 390 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 STX5Q13190 355 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 KEAP1Q14145 624 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 TMEM44Q2T9K0 475 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 RFTN2Q52LD8 501 aaPredicted RBP13.53□□□□□ -0.24
SPG7-210ENST00000564409 MISPQ8IVT2 679 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 UBQLNLQ8IYU4 475 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 METTL25Q8N6Q8 603 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 BANPQ8N9N5 519 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 NUP43Q8NFH3 380 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 OR2T11Q8NH01 316 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 ACTRT2Q8TDY3 377 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 STARD4Q96DR4 205 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 PGM2Q96G03 612 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 PPP3R2Q96LZ3 170 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 TSSK3Q96PN8 268 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 ROPN1BQ9BZX4 212 aaPredicted RBP13.53□□□□□ -0.24
SPG7-210ENST00000564409 C12orf65Q9H3J6 166 aaKnown RBP13.53□□□□□ -0.24
SPG7-210ENST00000564409 LIME1Q9H400 295 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 TUBB1Q9H4B7 451 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 PLEKHF2Q9H8W4 249 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 RNF122Q9H9V4 155 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 ROPN1Q9HAT0 212 aaPredicted RBP13.53□□□□□ -0.24
SPG7-210ENST00000564409 EQTNQ9NQ60 294 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 UBQLN4Q9NRR5 601 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 GIN1Q9NXP7 522 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 EIF3LQ9Y262 564 aaKnown RBP13.53□□□□□ -0.24
SPG7-210ENST00000564409 PLEKHA6Q9Y2H5 1048 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 TRAF6Q9Y4K3 522 aa13.53□□□□□ -0.24
SPG7-210ENST00000564409 SETD2Q9BYW2 2564 aaPredicted RBP13.52□□□□□ -0.24
SPG7-210ENST00000564409 C7orf72A4D263 438 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 AKAP10O43572 662 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 NDUFB5O43674 189 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 HRGP04196 525 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 CD8BP10966 210 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 BCKDHAP12694 445 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 TCEA1P23193 301 aaKnown RBP13.52□□□□□ -0.25
SPG7-210ENST00000564409 HPCAL1P37235 193 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 CD79BP40259 229 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 RFX3P48380 749 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 CLDN15P56746 228 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 RPL38P63173 70 aaKnown RBP13.52□□□□□ -0.25
SPG7-210ENST00000564409 GRAMD1BQ3KR37 738 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 UGT3A2Q3SY77 523 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 MFSD12Q6NUT3 480 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 TRABD2AQ86V40 505 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 DDIASQ8IXT1 998 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 CNEP1R1Q8N9A8 125 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 LRRN4CLQ8ND94 238 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 FAM110BQ8TC76 370 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 TWIST2Q8WVJ9 160 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 SLC9A6Q92581 669 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 CIDECQ96AQ7 238 aaPredicted RBP13.52□□□□□ -0.25
SPG7-210ENST00000564409 ZBTB8AQ96BR9 441 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 PINK1Q9BXM7 581 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 RTN4RQ9BZR6 473 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 ATAD3AQ9NVI7 634 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 ZNF226Q9NYT6 803 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 FLRT3Q9NZU0 649 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 LGALS13Q9UHV8 139 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 ATP6V1HQ9UI12 483 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 FIS1Q9Y3D6 152 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 TESMINQ9Y4I5 508 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 PTGDR2Q9Y5Y4 395 aa13.52□□□□□ -0.25
SPG7-210ENST00000564409 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 A0A1W2PQD3 144 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 TLDC2A0PJX2 215 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 GXYLT2A0PJZ3 443 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 H3BML4 177 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 LYPLA1O75608 230 aaPredicted RBP13.51□□□□□ -0.25
SPG7-210ENST00000564409 SMNDC1O75940 238 aaKnown RBP eCLIP13.51□□□□□ -0.25
SPG7-210ENST00000564409 ATE1O95260 518 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 IGKV1D-16P01601 117 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 ALOX5P09917 674 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 HPGDP15428 266 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 KLK2P20151 261 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 ALDH3A1P30838 453 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 KIR2DL2P43627 348 aaPredicted RBP13.51□□□□□ -0.25
SPG7-210ENST00000564409 PRIM2P49643 509 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 SUCLG1P53597 346 aaKnown RBP13.51□□□□□ -0.25
SPG7-210ENST00000564409 PRKAG1P54619 331 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 DEFB113Q30KQ7 82 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 GALNTL6Q49A17 601 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 ZNF385BQ569K4 471 aa13.51□□□□□ -0.25
SPG7-210ENST00000564409 ARL13AQ5H913 290 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms