RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 RNF145Q96MT1 663 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 ASPSCR1Q9BZE9 553 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 NTN4Q9HB63 628 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 FGF21Q9NSA1 209 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 CUTCQ9NTM9 273 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 KMT2EQ8IZD2 1858 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 TPST1O60507 370 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 ANKRD34CP0C6C1 535 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 RNH1P13489 461 aaKnown RBP16.51■□□□□ 0.23
GDE1-203ENST00000564172 ITGA2P17301 1181 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 RIPPLY1Q0D2K3 151 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 LTB4RQ15722 352 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 TNFAIP8L2Q6P589 184 aaPredicted RBP16.51■□□□□ 0.23
GDE1-203ENST00000564172 GPR135Q8IZ08 494 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 METTL27Q8N6F8 245 aaPredicted RBP16.51■□□□□ 0.23
GDE1-203ENST00000564172 DYNC2LI1Q8TCX1 351 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 SFXN5Q8TD22 340 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 HDAC2Q92769 488 aaKnown RBP16.51■□□□□ 0.23
GDE1-203ENST00000564172 ZNF501Q96CX3 271 aaPredicted RBP16.51■□□□□ 0.23
GDE1-203ENST00000564172 PEX11GQ96HA9 241 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 UGT2B28Q9BY64 529 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 PPA2Q9H2U2 334 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 WARS2Q9UGM6 360 aaKnown RBP16.51■□□□□ 0.23
GDE1-203ENST00000564172 SERTAD3Q9UJW9 196 aa16.51■□□□□ 0.23
GDE1-203ENST00000564172 IGHV5-10-1A0A0J9YXX1 117 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 PRSS44E7EML9 344 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 H0YIG0 161 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 PTP4A3O75365 173 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 RASAL1O95294 804 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 MC3RP41968 323 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 PRKAG1P54619 331 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 ITGA1P56199 1179 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 EEF1A2Q05639 463 aaKnown RBP16.5■□□□□ 0.23
GDE1-203ENST00000564172 ATP6AP1Q15904 470 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 NKG7Q16617 165 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 SYT16Q17RD7 645 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 FAM98BQ52LJ0 330 aaKnown RBP16.5■□□□□ 0.23
GDE1-203ENST00000564172 PRAMEF17Q5VTA0 474 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 BHLHB9Q6PI77 547 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 TTLL10Q6ZVT0 673 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 GALNT10Q86SR1 603 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 KAT2AQ92830 837 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 MOAP1Q96BY2 351 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 SYNDIG1Q9H7V2 258 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 ENOPH1Q9UHY7 261 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 SCN2AQ99250 2005 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 CACNA1HO95180 2353 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 TRAV6A0A075B6T7 132 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 EMC8O43402 210 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 GCM2O75603 506 aaPredicted RBP16.5■□□□□ 0.23
GDE1-203ENST00000564172 FHP07954 510 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 RAP2AP10114 183 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 ARAFP10398 606 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 GRK6P43250 576 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 GCGRP47871 477 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 CDK6Q00534 326 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 ZNF45Q02386 682 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 CHRNB3Q05901 458 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 SCARB2Q14108 478 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 ZNF630Q2M218 657 aaPredicted RBP16.5■□□□□ 0.23
GDE1-203ENST00000564172 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.5■□□□□ 0.23
GDE1-203ENST00000564172 RCBTB1Q8NDN9 531 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 ANKRD9Q96BM1 317 aaPredicted RBP16.5■□□□□ 0.23
GDE1-203ENST00000564172 DPYSL5Q9BPU6 564 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 C3orf14Q9HBI5 128 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 PCDHGB2Q9Y5G2 931 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 PMF1-BGLAPU3KQ54 211 aa16.5■□□□□ 0.23
GDE1-203ENST00000564172 HMGN4O00479 90 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 ZNF749O43361 778 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 ALAS2P22557 587 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 FASP25445 335 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 AQP1P29972 269 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 NUBP1P53384 320 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 GABARAPL2P60520 117 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 PRR5P85299 388 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 ARL6IP6Q8N6S5 226 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 OR56A1Q8NGH5 318 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 NFKBIDQ8NI38 313 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 RAB8BQ92930 207 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 POP5Q969H6 163 aaKnown RBP16.49■□□□□ 0.23
GDE1-203ENST00000564172 PYURFQ96I23 114 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 SLC35G5Q96KT7 338 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 TTYH2Q9BSA4 534 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 RBCK1Q9BYM8 510 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 ANKRA2Q9H9E1 313 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 SAMD4AQ9UPU9 718 aaKnown RBP16.49■□□□□ 0.23
GDE1-203ENST00000564172 TMEM5Q9Y2B1 443 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 PLD2O14939 933 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 ALBP02768 609 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 MT-ND1P03886 318 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 ATP1B1P05026 303 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 HMGN2P05204 90 aaKnown RBP16.49■□□□□ 0.23
GDE1-203ENST00000564172 CRYBA2P53672 197 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 GALEQ14376 348 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 LAIR1Q6GTX8 287 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 TMEM65Q6PI78 240 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 TAGAPQ8N103 731 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 NUP43Q8NFH3 380 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 OR10Q1Q8NGQ4 319 aa16.49■□□□□ 0.23
GDE1-203ENST00000564172 OR51Q1Q8NH59 317 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms