RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 KRT15P19012 456 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 CNTFP26441 200 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 SLC1A3P43003 542 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 ATP5OP48047 213 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 GDF10P55107 478 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 LIM2P55344 173 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 ARL13AQ5H913 290 aaPredicted RBP9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 OR5M10Q6IEU7 315 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 C11orf63Q6NUN7 778 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 AADACL2Q6P093 401 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 CTAGE6Q86UF2 777 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 ADGRG3Q86Y34 549 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 TUSC5Q8IXB3 177 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 PARP8Q8N3A8 854 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 SDR9C7Q8NEX9 313 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 OR4F17Q8NGA8 305 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 ALG3Q92685 438 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 RDH5Q92781 318 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 OR4F4Q96R69 305 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 SLC17A6Q9P2U8 582 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 DAPP1Q9UN19 280 aa9.06□□□□□ -0.96
HDGFL3-204ENST00000563790 SORL1Q92673 2214 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 A0A0G2JN53 185 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 LOC100996750A0A140TA64 210 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 CXorf49A8MYA2 514 aaPredicted RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 hCG_2039718K7EN88 272 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 MFAP3LO75121 409 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 RAD51DO75771 328 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 ZNF432O94892 652 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 LHBP01229 141 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 IFNW1P05000 195 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 CTNNA1P35221 906 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 SKIV2L2P42285 1042 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 MAGEA1P43355 309 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 OR3A2P47893 321 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 EIF3EP60228 445 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 LCN2P80188 198 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 POU3F1Q03052 451 aaPredicted RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 EMX1Q04741 257 aaPredicted RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 DUSP2Q05923 314 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 ZNF154Q13106 437 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 GANABQ14697 944 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 PPP1R3AQ16821 1122 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 SPRED3Q2MJR0 410 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 TRABD2AQ86V40 505 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 RETREG3Q86VR2 466 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 CCDC50Q8IVM0 306 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 TBC1D19Q8N5T2 526 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 GLB1L3Q8NCI6 653 aaPredicted RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 C17orf47Q8NEP4 570 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 TRPV3Q8NET8 790 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.05□□□□□ -0.965e-14■■■□□ 16.5
HDGFL3-204ENST00000563790 RNF128Q8TEB7 428 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 ABHD3Q8WU67 409 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 YIPF5Q969M3 257 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 GAL3ST3Q96A11 431 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 ADIPOR1Q96A54 375 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 PPWD1Q96BP3 646 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 R3HDM4Q96D70 268 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 RBM18Q96H35 190 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 GBP4Q96PP9 640 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 ZNF416Q9BWM5 594 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 KRTAP4-6Q9BYQ5 205 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 P2RY12Q9H244 342 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 ANKZF1Q9H8Y5 726 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 ZBTB26Q9HCK0 441 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 NPHS2Q9NP85 383 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 MARCH4Q9P2E8 410 aaPredicted RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 SLC17A7Q9P2U7 560 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 PRSS50Q9UI38 385 aa9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 PURGQ9UJV8 347 aaKnown RBP9.05□□□□□ -0.96
HDGFL3-204ENST00000563790 DNAH11Q96DT5 4516 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 PRMT5O14744 637 aaPredicted RBP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 RP2O75695 350 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 TSPAN9O75954 239 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 SYF2O95926 243 aaKnown RBP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 GOT2P00505 430 aaKnown RBP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 CCDC159P0C7I6 412 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 PABPC4LP0CB38 370 aaKnown RBP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 HK1P19367 917 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 TIA1P31483 386 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 GRIA1P42261 906 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 SESN2P58004 480 aaPredicted RBP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 MRPS11P82912 194 aaKnown RBP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 PRPSAP1Q14558 356 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 RNPS1Q15287 305 aaKnown RBP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 PARP6Q2NL67 630 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 HLA-DQA1Q5Y7H0 255 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 PTRHD1Q6GMV3 140 aaKnown RBP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 NEPROQ6NW34 567 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 CAVIN1Q6NZI2 390 aaKnown RBP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 PIWIL4Q7Z3Z4 852 aaKnown RBP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 C11orf44Q8N8P7 122 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 ANKRD53Q8N9V6 530 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 OR5M1Q8NGP8 315 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 JADE3Q92613 823 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 KCNJ9Q92806 393 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 OSBPL8Q9BZF1 889 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 TPK1Q9H3S4 243 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 LRRC40Q9H9A6 602 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms