RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TRIM45Q9H8W5 580 aaPredicted RBP9.37□□□□□ -0.91
SMG1-208ENST00000563448 NTN4Q9HB63 628 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 P4HTMQ9NXG6 502 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 FLRT3Q9NZU0 649 aa9.37□□□□□ -0.91
SMG1-208ENST00000563448 WWP2O00308 870 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 SYT5O00445 386 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 REM1O75628 298 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 PRSS23O95084 383 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 CYP4B1P13584 511 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 LIFP15018 202 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 ABCD3P28288 659 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 DCTP40126 519 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 RNF144AP50876 292 aaPredicted RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 ATP12AP54707 1039 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 PLCXD2Q0VAA5 305 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 Q0VFX4 171 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 LARS2Q15031 903 aaKnown RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 TRIP10Q15642 601 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 NRF1Q16656 503 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 LIN52Q52LA3 116 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 PDZK1Q5T2W1 519 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 TCTN3Q6NUS6 607 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 MRGPREQ86SM8 312 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 CARM1Q86X55 608 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 RAB43Q86YS6 212 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 OR4C3Q8NH37 302 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 VANGL1Q8TAA9 524 aaPredicted RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 CENPNQ96H22 339 aaPredicted RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 ZNF300Q96RE9 604 aaPredicted RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 ADOQ96SZ5 270 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 ARHGDIGQ99819 225 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 DEFB126Q9BYW3 111 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 GPN2Q9H9Y4 310 aaPredicted RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 RLIMQ9NVW2 624 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 NDUFAF4Q9P032 175 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 MYOTQ9UBF9 498 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 DNAJB9Q9UBS3 223 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 FBXL4Q9UKA2 621 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 MRTO4Q9UKD2 239 aaKnown RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 ZNF232Q9UNY5 417 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 J3KTA2 159 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 M0R3H8 397 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 FRS3O43559 492 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 BCAS1O75363 584 aaPredicted RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 DEAF1O75398 565 aaPredicted RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 LDLRP01130 860 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 CAPNS1P04632 268 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 NID1P14543 1247 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 PEX2P28328 305 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 YAP1P46937 504 aaKnown RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 PNLIPRP2P54317 469 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 PSMD4P55036 377 aaKnown RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 PSPHP78330 225 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 PLAURQ03405 335 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 KCNC4Q03721 635 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 ATP1A4Q13733 1029 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 FGFBP1Q14512 234 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 NPTX1Q15818 432 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 GRAMD1BQ3KR37 738 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 MRPL2Q5T653 305 aaKnown RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 OGFRL1Q5TC84 451 aaPredicted RBP9.36□□□□□ -0.91
SMG1-208ENST00000563448 RNF220Q5VTB9 566 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 ICA1LQ8NDH6 482 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 NXPE2Q96DL1 559 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 VPS50Q96JG6 964 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 VNN3Q9NY84 501 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 NPFFR2Q9Y5X5 522 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 ENPP4Q9Y6X5 453 aa9.36□□□□□ -0.91
SMG1-208ENST00000563448 MPDZO75970 2070 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 CDHR4A6H8M9 788 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 TPST2O60704 377 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 ABCB7O75027 752 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 SEMA7AO75326 666 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 UTS2O95399 124 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 IFNW1P05000 195 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 ITGAMP11215 1152 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 SPINK2P20155 84 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 IL12BP29460 328 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 NRG3P56975 720 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 PPP1R8Q12972 351 aaKnown RBP9.35□□□□□ -0.91
SMG1-208ENST00000563448 SRSF6Q13247 344 aaKnown RBP9.35□□□□□ -0.91
SMG1-208ENST00000563448 LRRC36Q1X8D7 754 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 OR2T5Q6IEZ7 315 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 LYPD8Q6UX82 237 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 TMEM179BQ7Z7N9 219 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 VASH2Q86V25 355 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 TAGAPQ8N103 731 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 ZNF614Q8N883 585 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 OR6T1Q8NGN1 323 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 OR2T29Q8NH02 315 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 KIAA1143Q96AT1 154 aaPredicted RBP9.35□□□□□ -0.91
SMG1-208ENST00000563448 BDH2Q9BUT1 245 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 CACYBPQ9HB71 228 aaKnown RBP9.35□□□□□ -0.91
SMG1-208ENST00000563448 WASF3Q9UPY6 502 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 DTNAQ9Y4J8 743 aa9.35□□□□□ -0.91
SMG1-208ENST00000563448 OR6C70A6NIJ9 312 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 SAC3D1A6NKF1 404 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 GNGT2O14610 69 aa9.34□□□□□ -0.91
SMG1-208ENST00000563448 FFAR1O14842 300 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms