RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 UEVLDQ8IX04 471 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 PQLC3Q8N755 202 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 SYT8Q8NBV8 401 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 SDR9C7Q8NEX9 313 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 OR2AK2Q8NG84 335 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 MARCH1Q8TCQ1 289 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TFAP2BQ92481 460 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 SEMA4DQ92854 862 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 DAZLQ92904 295 aaKnown RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TNFRSF14Q92956 283 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TMEM143Q96AN5 459 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 SLC47A1Q96FL8 570 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 ANKRD36BP1Q96IX9 119 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TGM7Q96PF1 710 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 ZNF317Q96PQ6 595 aaPredicted RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 KRT12Q99456 494 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TMEM175Q9BSA9 504 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 C20orf24Q9BUV8 137 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 OSBPL10Q9BXB5 764 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 NUSAP1Q9BXS6 441 aaKnown RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 PANK2Q9BZ23 570 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 IL22Q9GZX6 179 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 ELOVL6Q9H5J4 265 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 SLC7A8Q9UHI5 535 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 MEMO1Q9Y316 297 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 MYH9P35579 1960 aaKnown RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 NCANO14594 1321 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 LOXHD1Q8IVV2 1947 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 SMCHD1A6NHR9 2005 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 A0A1B0GTL3 188 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 LOC390937A0A1W2PQ73 354 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TCRBV5S1A1TA0A578 114 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 SLC22A23A1A5C7 686 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TUBAL3A6NHL2 446 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 GLRA3O75311 464 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 PLEKP08567 350 aaPredicted RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 HIST1H2AGP0C0S8 130 aaPredicted RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 NAGAP17050 411 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TCN1P20061 433 aaPredicted RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 BDKRB2P30411 391 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 HOXA6P31267 233 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 NPY2RP49146 381 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 ARRB1P49407 418 aaPredicted RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 CASP4P49662 377 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 ITIH4Q14624 930 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TMEM132DQ14C87 1099 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 ITPRIPL2Q3MIP1 535 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 FAM109BQ6ICB4 259 aaPredicted RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 OR4F3Q6IEY1 312 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 FUT10Q6P4F1 479 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 Q6ZRM9 215 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 DHDDSQ86SQ9 333 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 SERPINA9Q86WD7 417 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 MMD2Q8IY49 270 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 GSPT2Q8IYD1 628 aaKnown RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 RBFAQ8N0V3 343 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 NAGSQ8N159 534 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 SPEM1Q8N4L4 309 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TERB1Q8NA31 727 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 NPEPL1Q8NDH3 523 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 OR2L3Q8NG85 312 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 OR4C5Q8NGB2 326 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 OR51G2Q8NGK0 314 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 DTX3LQ8TDB6 740 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 HIST1H2ACQ93077 130 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TAAR8Q969N4 342 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TMEM18Q96B42 140 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 ASB9Q96DX5 294 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 PAGE5Q96GU1 130 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TGS1Q96RS0 853 aaKnown RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 CDCA3Q99618 268 aaPredicted RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 PELOQ9BRX2 385 aaKnown RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 NDUFAF3Q9BU61 184 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 TSSK1BQ9BXA7 367 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 NLNQ9BYT8 704 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 NDEL1Q9GZM8 345 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 HIPK2Q9H2X6 1198 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 NARFLQ9H6Q4 476 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 C10orf88Q9H8K7 445 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 MARCH7Q9H992 704 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 C20orf96Q9NUD7 363 aaPredicted RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 EPHA6Q9UF33 1036 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 MIOXQ9UGB7 285 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 ZNF490Q9ULM2 529 aaPredicted RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 UBQLN1Q9UMX0 589 aaKnown RBP4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 DUSP10Q9Y6W6 482 aa4.72□□□□□ -1.65
VPS35P1-201ENST00000563400 PLSCR5A0PG75 271 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 TMEM120BA0PK00 339 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 DPPA5A6NC42 116 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 HHLA1C9JL84 531 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 PDLIM1O00151 329 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 BTN3A3O00478 584 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 CLDN5O00501 218 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 TRAFD1O14545 582 aaPredicted RBP4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 RS1O15537 224 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 KDELR3O43731 214 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 HCN1O60741 890 aa4.71□□□□□ -1.66
VPS35P1-201ENST00000563400 STX11O75558 287 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms