RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CD200R1Q8TD46 325 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 ANKRD7Q92527 254 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 KCNJ9Q92806 393 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 FAHD2AQ96GK7 314 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 CCDC140Q96MF4 163 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 SORCS2Q96PQ0 1159 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 HBEGFQ99075 208 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 VRK1Q99986 396 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 SPATA25Q9BR10 227 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 PELOQ9BRX2 385 aaKnown RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 NUP62CLQ9H1M0 184 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 RPF2Q9H7B2 306 aaKnown RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 LPAR2Q9HBW0 351 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 TREX1Q9NSU2 369 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 PDP1Q9P0J1 537 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 MCTS1Q9ULC4 181 aaKnown RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 NENFQ9UMX5 172 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 MGAT4BQ9UQ53 548 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 COA3Q9Y2R0 106 aaPredicted RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.66□□□□□ -1.66
HERC1-213ENST00000561359 MRPS18CQ9Y3D5 142 aaKnown RBP4.66□□□□□ -1.66
HERC1-213ENST00000561359 ZNF337Q9Y3M9 751 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 KCNE2Q9Y6J6 123 aa4.66□□□□□ -1.66
HERC1-213ENST00000561359 NOTCH3Q9UM47 2321 aa4.65□□□□□ -1.66
HERC1-213ENST00000561359 LOC105371242A0A075B767 164 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 GOLGA6L10A0A0M3HER8 536 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 CTAGE9A4FU28 777 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 UGT2B11O75310 529 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 SYNGR4O95473 234 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 AIFM1O95831 613 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 GUCA1CO95843 209 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 PRB2P02812 416 aaPredicted RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 CLPSP04118 112 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 F7P08709 466 aaPredicted RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 CELA3BP08861 270 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 TACSTD2P09758 323 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 NAGAP17050 411 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 HK1P19367 917 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 OGNP20774 298 aaKnown RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 GRK2P25098 689 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 ATP5A1P25705 553 aaKnown RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 AGTR1P30556 359 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 TLX1P31314 330 aaPredicted RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 RGS4P49798 205 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 DSCR4P56555 118 aaPredicted RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 HMGCS1Q01581 520 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 GABPB1Q06547 395 aaPredicted RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 SPOCK1Q08629 439 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 PLCXD2Q0VAA5 305 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 ITGADQ13349 1161 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 IQCB1Q15051 598 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 SLC18A3Q16572 532 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 PRSS53Q2L4Q9 553 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 ADPRMQ3LIE5 342 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 MROH9Q5TGP6 573 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 MRM1Q6IN84 353 aaKnown RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 LRRC8EQ6NSJ5 796 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 UGT3A1Q6NUS8 523 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 MFSD12Q6NUT3 480 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 ZNF549Q6P9A3 640 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 CD300LDQ6UXZ3 194 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 RBMS3Q6XE24 437 aaKnown RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 B3GLCTQ6Y288 498 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 CENPUQ71F23 418 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 SLC46A3Q7Z3Q1 461 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 THOC6Q86W42 341 aaKnown RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 KRT78Q8N1N4 520 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 MYO1HQ8N1T3 1032 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 METTL25Q8N6Q8 603 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 CEP112Q8N8E3 955 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 ACOT4Q8N9L9 421 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 OR52B6Q8NGF0 335 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 OR5M1Q8NGP8 315 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 EEF1AKMT1Q8WVE0 214 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 TANKQ92844 425 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 HGDQ93099 445 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 ADIPOR1Q96A54 375 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 TMEM186Q96B77 213 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 FBXL8Q96CD0 374 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 TMCO6Q96DC7 493 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 MTBPQ96DY7 904 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 OMA1Q96E52 524 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 FBXO17Q96EF6 278 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 MFSD3Q96ES6 412 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 VPS39Q96JC1 886 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 DUX5Q96PT3 197 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 LRRC37BQ96QE4 947 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 F2RL3Q96RI0 385 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 INPP5KQ9BT40 448 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 C1QTNF5Q9BXJ0 243 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 TRIM54Q9BYV2 358 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 OSBPL8Q9BZF1 889 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 ROGDIQ9GZN7 287 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 NXF5Q9H1B4 397 aaKnown RBP4.65□□□□□ -1.67
HERC1-213ENST00000561359 GOLPH3Q9H4A6 298 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 SMYD2Q9NRG4 433 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 GLRX2Q9NS18 164 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 NPAP1Q9NZP6 1156 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 NTMQ9P121 344 aa4.65□□□□□ -1.67
HERC1-213ENST00000561359 TRMT6Q9UJA5 497 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms