RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SNX11Q9Y5W9 270 aa8.04□□□□□ -1.12
CCDC33-209ENST00000560565 HELZ2Q9BYK8 2649 aaKnown RBP8.04□□□□□ -1.12
CCDC33-209ENST00000560565 ANKRD17O75179 2603 aaKnown RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PRAMEF33A0A0G2JMD5 474 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 A6NL46 340 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 A8MV72 311 aaPredicted RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ISM1B1AKI9 464 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 I3L521 148 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 GAPDHSO14556 408 aaPredicted RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PCDH17O14917 1159 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 LRRTM2O43300 516 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 TSPAN6O43657 245 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PRAMEF10O60809 474 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 LRP3O75074 770 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 RGS9O75916 674 aaPredicted RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 SLCO2B1O94956 709 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 SOD1P00441 154 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 EPHX1P07099 455 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 C1SP09871 688 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 FURINP09958 794 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ETFAP13804 333 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 NAT1P18440 290 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 GABRG2P18507 467 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ZP3P21754 424 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ELAVL4P26378 380 aaKnown RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 AQP1P29972 269 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 SOAT1P35610 550 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 HSD17B2P37059 387 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 GIPRP48546 466 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PITPNBP48739 271 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 CCT3P49368 545 aaKnown RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PFN3P60673 137 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 TRA2BP62995 288 aaKnown RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 MRPS10P82664 201 aaKnown RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 DYRK1AQ13627 763 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 DOC2AQ14183 400 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 GALEQ14376 348 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 MLC1Q15049 377 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 SNAPC1Q16533 368 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ENTPD8Q5MY95 495 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 GARNL3Q5VVW2 1013 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ZNF776Q68DI1 518 aaPredicted RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 GPR139Q6DWJ6 353 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 TYW3Q6IPR3 259 aaKnown RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ADNP2Q6IQ32 1131 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 RPL13AP3Q6NVV1 102 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 RRM2BQ7LG56 351 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 C16orf62Q7Z3J2 963 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 TECPR1Q7Z6L1 1165 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 TSPAN33Q86UF1 283 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PDZD3Q86UT5 571 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 SLC43A2Q8N370 569 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 TRAM1L1Q8N609 369 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ESX1Q8N693 406 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 TCEANCQ8N8B7 351 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PNPLA1Q8N8W4 532 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 TMEM145Q8NBT3 493 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 SRFBP1Q8NEF9 429 aaKnown RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 OR56A3Q8NH54 315 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 OR56B4Q8NH76 319 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 SETD7Q8WTS6 366 aaKnown RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 RLN3Q8WXF3 142 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PHYHIPQ92561 330 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ZBED6CLQ96FA7 236 aaPredicted RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 MAP6Q96JE9 813 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 LRR1Q96L50 414 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ZNF582Q96NG8 517 aaPredicted RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PELOQ9BRX2 385 aaKnown RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 WRAP53Q9BUR4 548 aaKnown RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 GSX2Q9BZM3 304 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 DUSP15Q9H1R2 295 aaPredicted RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ARRDC1-AS1Q9H2J1 176 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 C12orf4Q9NQ89 552 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PLSCR3Q9NRY6 295 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 CYSLTR2Q9NS75 346 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 KLHL28Q9NXS3 571 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 TVP23BQ9NYZ1 205 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 ZNF624Q9P2J8 865 aaPredicted RBP8.03□□□□□ -1.12
CCDC33-209ENST00000560565 NLKQ9UBE8 527 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 REV1Q9UBZ9 1251 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 SEC14L3Q9UDX4 400 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 PFDN2Q9UHV9 154 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 MGAT4AQ9UM21 535 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 CACNG2Q9Y698 323 aa8.03□□□□□ -1.12
CCDC33-209ENST00000560565 CACNA1EQ15878 2313 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 PTPN13Q12923 2485 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 ARPC4-TTLL3A0A0A6YYG9 625 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 LINC00854A0A1B0GVQ3 168 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 KDM4EB2RXH2 506 aaPredicted RBP8.02□□□□□ -1.13
CCDC33-209ENST00000560565 H3BM21 787 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 M0R233 179 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 SYT5O00445 386 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 AP3D1O14617 1153 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 TLX2O43763 284 aaPredicted RBP8.02□□□□□ -1.13
CCDC33-209ENST00000560565 SSX4O60224 188 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 ZNF217O75362 1048 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 PAHP00439 452 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 CSF2P04141 144 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 HBQ1P09105 142 aa8.02□□□□□ -1.13
CCDC33-209ENST00000560565 ELFN1P0C7U0 828 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms