RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 C6orf136Q5SQH8 315 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 MTFR2Q6P444 385 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 TMEM81Q6P7N7 255 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 TRILQ7L0X0 811 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 ZNF551Q7Z340 670 aaPredicted RBP5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 SLC34A3Q8N130 599 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 OR2L13Q8N349 312 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 RPRMLQ8N4K4 120 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 ZNF808Q8N4W9 903 aaPredicted RBP5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 ZNF781Q8N8C0 355 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 TMBIM1Q969X1 311 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 CIDECQ96AQ7 238 aaPredicted RBP5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 ZNF597Q96LX8 424 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 PPP3R2Q96LZ3 170 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 JSRP1Q96MG2 331 aaPredicted RBP5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 NODALQ96S42 347 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 SORT1Q99523 831 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 KCNJ15Q99712 375 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 VKORC1Q9BQB6 163 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 ANGPTL4Q9BY76 406 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 REEP4Q9H6H4 257 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 TNFRSF10DQ9UBN6 386 aa5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 C19orf53Q9UNZ5 99 aaPredicted RBP5.5□□□□□ -1.53
CTDSPL2-204ENST00000558966 TMEM114B3SHH9 223 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 NPIPA2E9PIF3 369 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 NPIPA3F8WFD2 350 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 TSPAN2O60636 221 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 ERLIN1O75477 346 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 HSPA4LO95757 839 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 IFI6P09912 130 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 CPEP16870 476 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 BGNP21810 368 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 CDK9P50750 372 aaKnown RBP5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 ABCE1P61221 599 aaKnown RBP5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 PTGR1Q14914 329 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 SLC10A1Q14973 349 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 CYP2R1Q6VVX0 501 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 RPTNQ6XPR3 784 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 NUP54Q7Z3B4 507 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 WDR53Q7Z5U6 358 aaPredicted RBP5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 MRGPRGQ86SM5 289 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 CROCCP2Q86T23 111 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 SLC44A2Q8IWA5 706 aaPredicted RBP5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 LIX1Q8N485 282 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 MARVELD2Q8N4S9 558 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 ANKRD42Q8N9B4 389 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 OR4N2Q8NGD1 307 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 PPP1R14CQ8TAE6 165 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 PHF10Q8WUB8 498 aaKnown RBP5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 RNF138Q8WVD3 245 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 PPCDCQ96CD2 204 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 TLCD1Q96CP7 247 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 ELP4Q96EB1 424 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 SLC35A4Q96G79 324 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 TMEM41AQ96HV5 264 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 COL21A1Q96P44 957 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 GNRHR2Q96P88 292 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 SPOCK3Q9BQ16 436 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 C1orf50Q9BV19 199 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 SLC6A15Q9H2J7 730 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 UBQLN3Q9H347 655 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 GALNT9Q9HCQ5 603 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 KCNK9Q9NPC2 374 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 PNPLA3Q9NST1 481 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 DDX18Q9NVP1 670 aaKnown RBP5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 QPCTLQ9NXS2 382 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 TAS2R9Q9NYW1 312 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 SPRR3Q9UBC9 169 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 ATP6V1HQ9UI12 483 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 HAO1Q9UJM8 370 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 C15orf41Q9Y2V0 281 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 INTS1Q8N201 2190 aaKnown RBP5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 TRGV5A0A0B4J1U4 118 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 TMEM120BA0PK00 339 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 OR14I1A6ND48 311 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 PRAMEF25A6NGN4 478 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 OR6C70A6NIJ9 312 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 B4DXG7 233 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 SCAMP2O15127 329 aaKnown RBP5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 HCN1O60741 890 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 ICOSLGO75144 302 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 COQ9O75208 318 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 REM1O75628 298 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 SNX4O95219 450 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 MYZAPP0CAP1 466 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 EFNA1P20827 205 aaPredicted RBP5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 GRK2P25098 689 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 GDF1P27539 372 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 PTPN6P29350 595 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 DCTP40126 519 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 ASMTP46597 345 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 SLC1A6P48664 564 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 TRPC1P48995 793 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 MAN2A2P49641 1150 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 RPP38P78345 283 aaKnown RBP5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 BST1Q10588 318 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 HSPB3Q12988 150 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 IKZF1Q13422 519 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 ART3Q13508 389 aa5.49□□□□□ -1.53
CTDSPL2-204ENST00000558966 PDCD2Q16342 344 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms