RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 BARHL1Q9BZE3 327 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 OR51E2Q9H255 320 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 TFB2MQ9H5Q4 396 aaKnown RBP3.02□□□□□ -1.93
HERC1-203ENST00000558532 ASB7Q9H672 318 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 RANBP3Q9H6Z4 567 aaPredicted RBP3.02□□□□□ -1.93
HERC1-203ENST00000558532 PPP1R3EQ9H7J1 279 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 IL1RL2Q9HB29 575 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 Q9N2J8 555 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 FZD3Q9NPG1 666 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 IFT46Q9NQC8 304 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 ITM2CQ9NQX7 267 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 PXMP2Q9NR77 195 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 ZNF275Q9NSD4 429 aaPredicted RBP3.02□□□□□ -1.93
HERC1-203ENST00000558532 FARSBQ9NSD9 589 aaKnown RBP3.02□□□□□ -1.93
HERC1-203ENST00000558532 OSER1Q9NX31 292 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 MIOSQ9NXC5 875 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 DPP3Q9NY33 737 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 NDUFAF4Q9P032 175 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 KIF17Q9P2E2 1029 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 KLHL8Q9P2G9 620 aaPredicted RBP3.02□□□□□ -1.93
HERC1-203ENST00000558532 SPASTQ9UBP0 616 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 SEC14L4Q9UDX3 406 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 POLLQ9UGP5 575 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 SRP68Q9UHB9 627 aaKnown RBP3.02□□□□□ -1.93
HERC1-203ENST00000558532 KCND3Q9UK17 655 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 RAB23Q9ULC3 237 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 ACSL5Q9ULC5 683 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 TNFSF13BQ9Y275 285 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 KLHL20Q9Y2M5 609 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 LSM2Q9Y333 95 aaKnown RBP3.02□□□□□ -1.93
HERC1-203ENST00000558532 HSPB11Q9Y547 144 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 GMPPBQ9Y5P6 360 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 ALG5Q9Y673 324 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 PATJQ8NI35 1801 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 CITO14578 2027 aa3.02□□□□□ -1.93
HERC1-203ENST00000558532 A0A096LPI6 279 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 TRBV5-7A0A0A0MS05 114 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 A0A1B0GVI7 797 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 A0A1W2PRG6 482 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 hCG_1807616A0A1W2PRN6 198 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 CIB4A0PJX0 185 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 ARRDC5A6NEK1 342 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 OR6C65A6NJZ3 312 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 WASHC1A8K0Z3 465 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 KRTAP29-1A8MX34 341 aaPredicted RBP3.01□□□□□ -1.93
HERC1-203ENST00000558532 KRBOX1C9JBD0 128 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 G3V3Q6 166 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 SH3BP5O60239 455 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 TPST2O60704 377 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 KERAO60938 352 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 SCN2BO60939 215 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 GPX5O75715 221 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 SNAPC5O75971 98 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 OR5F1O95221 314 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 PTHP01270 115 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 IFNA2P01563 188 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 IFNA7P01567 189 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 F7P08709 466 aaPredicted RBP3.01□□□□□ -1.93
HERC1-203ENST00000558532 ACSM4P0C7M7 580 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 OR56A5P0C7T3 313 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 MAGP20916 626 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 LHCGRP22888 699 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 PSMA3P25788 255 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 EPHA2P29317 976 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 PTPN6P29350 595 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 C21orf33P30042 268 aaPredicted RBP3.01□□□□□ -1.93
HERC1-203ENST00000558532 SLC6A1P30531 599 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 HOXC13P31276 330 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 RPL9P32969 192 aaKnown RBP3.01□□□□□ -1.93
HERC1-203ENST00000558532 BRCC3P46736 316 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 THBS3P49746 956 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 GMPSP49915 693 aaPredicted RBP3.01□□□□□ -1.93
HERC1-203ENST00000558532 PGGT1BP53609 377 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 RAG2P55895 527 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 MTPNP58546 118 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 ABATP80404 500 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 HOXC5Q00444 222 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 HSF2Q03933 536 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 SCRN3Q0VDG4 424 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 PMPCAQ10713 525 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 ABRQ12979 859 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 NPRL3Q12980 569 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 EXOSC2Q13868 293 aaKnown RBP3.01□□□□□ -1.93
HERC1-203ENST00000558532 PTGR1Q14914 329 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 RPS6KA2Q15349 733 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 SF3A2Q15428 464 aaKnown RBP3.01□□□□□ -1.93
HERC1-203ENST00000558532 TSC22D1Q15714 1073 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 STXBP2Q15833 593 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 SOWAHAQ2M3V2 549 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 GOLGA7BQ2TAP0 167 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 GPR33Q49SQ1 333 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 ATP6AP1LQ52LC2 224 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 KLHL12Q53G59 568 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 SOWAHCQ53LP3 525 aaPredicted RBP3.01□□□□□ -1.93
HERC1-203ENST00000558532 INO80DQ53TQ3 878 aaPredicted RBP3.01□□□□□ -1.93
HERC1-203ENST00000558532 NHLRC3Q5JS37 347 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 PDZK1Q5T2W1 519 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 LCN1P1Q5VSP4 162 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 FAM171A1Q5VUB5 890 aa3.01□□□□□ -1.93
HERC1-203ENST00000558532 FAM109BQ6ICB4 259 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms