RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 LDB3O75112 727 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 FBXO24O75426 580 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 GJB3O75712 270 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 C6P13671 934 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 GGT1P19440 569 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 IL32P24001 234 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 SOX9P48436 509 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 ARG2P78540 354 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 MRPL49Q13405 166 aaKnown RBP13.21□□□□□ -0.29
SPG11-210ENST00000558319 P2RY14Q15391 338 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 C12orf45Q8N5I9 185 aaPredicted RBP13.21□□□□□ -0.29
SPG11-210ENST00000558319 TRAM1L1Q8N609 369 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 HHIPL1Q96JK4 782 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 TAS2R8Q9NYW2 309 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 RHBDD3Q9Y3P4 386 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 A8MXE2 369 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 CLN5O75503 358 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 TMEM225BP0DP42 221 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 MGST1P10620 155 aaKnown RBP13.21□□□□□ -0.29
SPG11-210ENST00000558319 F3P13726 295 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 HNRNPFP52597 415 aaKnown RBP13.21□□□□□ -0.29
SPG11-210ENST00000558319 MS4A2Q01362 244 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 GPR19Q15760 415 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 C6orf132Q5T0Z8 1188 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 LRIF1Q5T3J3 769 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 OR1S1Q8NH92 325 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 OR5P2Q8WZ92 322 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 ZNF578Q96N58 590 aaPredicted RBP13.21□□□□□ -0.29
SPG11-210ENST00000558319 ZNF599Q96NL3 588 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 NUDT22Q9BRQ3 303 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 ACAD8Q9UKU7 415 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 SLC6A5Q9Y345 797 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 IMPA2O14732 288 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 P04436 131 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 ACTBP60709 375 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 ACTG1P63261 375 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 EEF1A2Q05639 463 aaKnown RBP13.21□□□□□ -0.29
SPG11-210ENST00000558319 POU4F2Q12837 409 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 CATSPEREQ5SY80 951 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 SLX4IPQ5VYV7 408 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 C6orf120Q7Z4R8 191 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 MCATQ8IVS2 390 aaKnown RBP13.21□□□□□ -0.29
SPG11-210ENST00000558319 ST6GALNAC4Q9H4F1 302 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 GPN2Q9H9Y4 310 aaPredicted RBP13.21□□□□□ -0.29
SPG11-210ENST00000558319 DNAJB11Q9UBS4 358 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 OR52A4PA6NMU1 304 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 PRAMEF2O60811 474 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 NXPH3O95157 252 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 HOXC5Q00444 222 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 PAFAH1B3Q15102 231 aaKnown RBP13.21□□□□□ -0.3
SPG11-210ENST00000558319 ZFAND4Q86XD8 727 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 ADAMTS19Q8TE59 1207 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 SAMD8Q96LT4 415 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 BTBD2Q9BX70 525 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 AIG1Q9NVV5 245 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 FNIP2Q9P278 1114 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 PUS1Q9Y606 427 aaKnown RBP eCLIP13.21□□□□□ -0.3
SPG11-210ENST00000558319 CEPT1Q9Y6K0 416 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 PIAS3Q9Y6X2 628 aa13.21□□□□□ -0.3
SPG11-210ENST00000558319 TGM5O43548 720 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 CA3P07451 260 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 RAB41Q5JT25 222 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 TEX26Q8N6G2 289 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 MRPL38Q96DV4 380 aaKnown RBP13.2□□□□□ -0.3
SPG11-210ENST00000558319 WDR92Q96MX6 357 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 TCEAL7Q9BRU2 100 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 FKRPQ9H9S5 495 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 PPP1R14DQ9NXH3 145 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 B3GNT3Q9Y2A9 372 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 FADS1O60427 444 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 ZNF888P0CJ79 500 aaPredicted RBP13.2□□□□□ -0.3
SPG11-210ENST00000558319 GAAP10253 952 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 NR2C1P13056 603 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 RAC2P15153 192 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 PRSS3P35030 304 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 SERPINF1P36955 418 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 SF3A2Q15428 464 aaKnown RBP13.2□□□□□ -0.3
SPG11-210ENST00000558319 OR4D1Q15615 310 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 BLOC1S3Q6QNY0 202 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 LRRC18Q8N456 261 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 RNF175Q8N4F7 328 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 IL17RDQ8NFM7 739 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 OR5D16Q8NGK9 328 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 HPSE2Q8WWQ2 592 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 ADAM18Q9Y3Q7 739 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 KIDINS220Q9ULH0 1771 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 C7P10643 843 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 PSMB10P40306 273 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 TAS2R20P59543 309 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
SPG11-210ENST00000558319 PEA15Q15121 130 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 AMIGO3Q86WK7 504 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 TMEFF1Q8IYR6 380 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 MINDY1Q8N5J2 469 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 SLC29A1Q99808 456 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 FAM53CQ9NYF3 392 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 TSPAN11A1L157 253 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 NME4O00746 187 aa13.2□□□□□ -0.3
SPG11-210ENST00000558319 ZNF30P17039 623 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms