RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 F5H6K3 240 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 C16orf97H3BN30 126 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ZNF701M0R085 212 aaPredicted RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 PDLIM1O00151 329 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 INPP4BO15327 924 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 TAPBPO15533 448 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 FZD7O75084 574 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 PAK4O96013 591 aaPredicted RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 CRYGCP07315 174 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 PLEKP08567 350 aaPredicted RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 FGF3P11487 239 aaPredicted RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 ATP1B2P14415 290 aaPredicted RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 ETS2P15036 469 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 MMP11P24347 488 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 CALML3P27482 149 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 RPL9P32969 192 aaKnown RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 ID1P41134 155 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 BRCC3P46736 316 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 CSNK1EP49674 416 aaKnown RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 NOVA1P51513 510 aaKnown RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 PLP1P60201 277 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 YWHAGP61981 247 aaKnown RBP eCLIP3.28□□□□□ -1.88
TDP1-217ENST00000557782 KLRC3Q07444 240 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ASPHQ12797 758 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 C1orf61Q13536 156 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ITPK1Q13572 414 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 PEX6Q13608 980 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 CRMP1Q14194 572 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 TGFBIQ15582 683 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 CCDC6Q16204 474 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 MICBQ29980 383 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ALKBH6Q3KRA9 238 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 KRT71Q3SY84 523 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ACCSLQ4AC99 568 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 NEPROQ6NW34 567 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ZNF790Q6PG37 636 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 HACD2Q6Y1H2 254 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 HSD11B1LQ7Z5J1 315 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 DHDDSQ86SQ9 333 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 SERPINA9Q86WD7 417 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 SLC35F2Q8IXU6 374 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 CLEC4FQ8N1N0 589 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ZNF843Q8N446 348 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 TRIML2Q8N7C3 387 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 NRACQ8N912 160 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ZSCAN4Q8NAM6 433 aaPredicted RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 OR9Q2Q8NGE9 314 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 OR10G8Q8NGN5 311 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 OR1K1Q8NGR3 316 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 CNIH3Q8TBE1 160 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 GPX8Q8TED1 209 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 MITD1Q8WV92 249 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 RPL36ALQ969Q0 106 aaKnown RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 EFHD2Q96C19 240 aaPredicted RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 DUX5Q96PT3 197 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 IL4I1Q96RQ9 567 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ST6GALNAC5Q9BVH7 336 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ILKAPQ9H0C8 392 aaPredicted RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 MTHFD2LQ9H903 347 aaPredicted RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 ANKRA2Q9H9E1 313 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 Q9HAA7 133 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 AGPAT3Q9NRZ7 376 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 KLK11Q9UBX7 282 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 PITPNC1Q9UKF7 332 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 TBC1D24Q9ULP9 559 aa3.28□□□□□ -1.88
TDP1-217ENST00000557782 PRPF19Q9UMS4 504 aaKnown RBP3.28□□□□□ -1.88
TDP1-217ENST00000557782 FRMPD4Q14CM0 1322 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 TRBV11-1A0A0K0K1C0 115 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 LOC100506127A0A0U1RQW1 187 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 CLEC18AA5D8T8 446 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 TUBAL3A6NHL2 446 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 PRR23D1E9PI22 279 aaPredicted RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 G3V4G9 280 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 TM9SF1O15321 606 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 YKT6O15498 198 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 PPIHO43447 177 aaKnown RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 SRPX2O60687 465 aaPredicted RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 DUSP11O75319 330 aaKnown RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 PDE5AO76074 875 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 DIRAS1O95057 198 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 STAMBPO95630 424 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 TOMM40O96008 361 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 HBQ1P09105 142 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 PRR23D2P0DMB1 279 aaPredicted RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 ATP5A1P25705 553 aaKnown RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 SAA4P35542 130 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 NAMPTP43490 491 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 RPS5P46782 204 aaKnown RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 STK19P49842 368 aaPredicted RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 BCAP31P51572 246 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 XGP55808 180 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 RPS6P62753 249 aaKnown RBP3.27□□□□□ -1.89
TDP1-217ENST00000557782 GUCY2DQ02846 1103 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 LIPEQ05469 1076 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 DPTQ07507 201 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 EMC2Q15006 297 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 STK38Q15208 465 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 RAB35Q15286 201 aa3.27□□□□□ -1.89
TDP1-217ENST00000557782 KNOP1Q1ED39 458 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms