RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 HOXC4P09017 264 aaPredicted RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 ANKRD34CP0C6C1 535 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 FAM58BPP0C7Q3 252 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 RSPH10BP0C881 870 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 EPB41P11171 864 aaKnown RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 CYBAP13498 195 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 ADRA2CP18825 462 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 MSNP26038 577 aaKnown RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 PRKCIP41743 596 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 CCZ1BP86790 482 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 CCZ1P86791 482 aaPredicted RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 TFDP1Q14186 410 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 EMC2Q15006 297 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 CDO1Q16878 200 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 HSDL1Q3SXM5 330 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 CASC4Q6P4E1 433 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 ADGRD2Q7Z7M1 963 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 ZNF410Q86VK4 478 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 FBXO16Q8IX29 292 aaPredicted RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 CCDC170Q8IYT3 715 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 UBQLNLQ8IYU4 475 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 TDHQ8IZJ6 230 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 OR8H3Q8N146 312 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 SAMD12Q8N8I0 201 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 OCC1Q8TAD7 63 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 UBE2Q2Q8WVN8 375 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 BSCL2Q96G97 398 aaPredicted RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 CEP170P1Q96L14 293 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 CCDC114Q96M63 670 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 NAP1L5Q96NT1 182 aaPredicted RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 TSPAN18Q96SJ8 248 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 PRMT1Q99873 361 aaKnown RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 ADPGKQ9BRR6 497 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 CCM2Q9BSQ5 444 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 C2orf40Q9H1Z8 148 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 MTIF3Q9H2K0 278 aaKnown RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 NT5DC2Q9H857 520 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 PLSCR3Q9NRY6 295 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 ZNHIT6Q9NWK9 470 aaKnown RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 ZNF446Q9NWS9 450 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 ARMCX3Q9UH62 379 aaPredicted RBP2.79□□□□□ -1.96
VRK1-207ENST00000557352 COQ4Q9Y3A0 265 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 NUP205Q92621 2012 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 PLXNA3P51805 1871 aa2.79□□□□□ -1.96
VRK1-207ENST00000557352 HELZP42694 1942 aaKnown RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 GBF1Q92538 1859 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 ADGRA3Q8IWK6 1321 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 A0A0B4J203 849 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 A0A1W2PRQ8 180 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 TMCO5BA8MYB1 307 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 NEDD8-MDP1E9PL57 170 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 DDX39AO00148 427 aaKnown RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 SAP18O00422 153 aaKnown RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 B4GAT1O43505 415 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 FAM189A1O60320 539 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 TOM1L1O75674 476 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 CABYRO75952 493 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 AKAP3O75969 853 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 LYPD3O95274 346 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 RLN1P04808 185 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 ZNF32P17041 273 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 GLRA2P23416 452 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 GDF1P27539 372 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 TMOD1P28289 359 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 HOXD10P28358 340 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 NMT1P30419 496 aaKnown RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 ADSSP30520 456 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 AXLP30530 894 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 HMGCLP35914 325 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 MTIF2P46199 727 aaKnown RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 AP3M2P53677 418 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 STX17P56962 302 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 PTENP60484 403 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 UBXN1Q04323 297 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 CETN1Q12798 172 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 GPR50Q13585 617 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 PTK6Q13882 451 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 CEACAM7Q14002 265 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 DEFB115Q30KQ5 88 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 CCDC40Q4G0X9 1142 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 MFSD14CQ5VZR4 134 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 WSCD1Q658N2 575 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 SLC39A4Q6P5W5 647 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 DCLRE1AQ6PJP8 1040 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 IGFL2Q6UWQ7 119 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 NHLRC1Q6VVB1 395 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 GBP6Q6ZN66 633 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 KRT77Q7Z794 578 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 NLRP14Q86W24 1093 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 MEX3DQ86XN8 651 aaKnown RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 ZBTB8OSQ8IWT0 167 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 TMEM99Q8N816 258 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 ZNF397Q8NF99 534 aaPredicted RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 OR8K1Q8NGG5 319 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 UBLCP1Q8WVY7 318 aaPredicted RBP2.78□□□□□ -1.96
VRK1-207ENST00000557352 TAF4BQ92750 862 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 DNASE1L2Q92874 299 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 EXOC4Q96A65 974 aa2.78□□□□□ -1.96
VRK1-207ENST00000557352 CAPNS2Q96L46 248 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms