RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 MRGBPQ9NV56 204 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 B4GALT7Q9UBV7 327 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-225ENST00000556798 C15orf41Q9Y2V0 281 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 LIPGQ9Y5X9 500 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 MED12Q93074 2177 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 TRBV5-3A0A0A0MS03 114 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 LOC100653049A0A140TA62 436 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 ANKUB1A6NFN9 424 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 B4DXG7 233 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 J3QKU1 62 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 FCMRO60667 390 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 CCDC22O60826 627 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 KRT34O76011 436 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 SOX30O94993 753 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 AGR2O95994 175 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 AK1P00568 194 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 GDF1P27539 372 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 DCTP40126 519 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 NFYCQ13952 458 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 MAPRE2Q15555 327 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 GPR68Q15743 365 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 SYPL1Q16563 259 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 GPAT3Q53EU6 434 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 TIGD3Q6B0B8 471 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 GFRALQ6UXV0 394 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 DPP10Q8N608 796 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 POU5F2Q8N7G0 328 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 ANKFN1Q8N957 763 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 ROPN1LQ96C74 230 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 TRIM8Q9BZR9 551 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 IKZF5Q9H5V7 419 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 ZDHHC11Q9H8X9 412 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 PPP4R1LQ9P1A2 415 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 MKLN1Q9UL63 735 aa15.96■□□□□ 0.15
SHMT2-225ENST00000556798 HEATR5AQ86XA9 2040 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 ANGPTL1O95841 491 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 NUDT7P0C024 238 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 HPGDP15428 266 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 TBXA2RP21731 343 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 ELAVL4P26378 380 aaKnown RBP15.95■□□□□ 0.14
SHMT2-225ENST00000556798 ADSLP30566 484 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-225ENST00000556798 CLK3P49761 638 aaKnown RBP15.95■□□□□ 0.14
SHMT2-225ENST00000556798 ANXA11P50995 505 aaKnown RBP15.95■□□□□ 0.14
SHMT2-225ENST00000556798 DSTNP60981 165 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 TOMM20Q15388 145 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 MMEL1Q495T6 779 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 REP15Q6BDI9 236 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 TYW3Q6IPR3 259 aaKnown RBP15.95■□□□□ 0.14
SHMT2-225ENST00000556798 PIGWQ7Z7B1 504 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 HMGN2P46Q86SG4 172 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 C10orf111Q8N326 155 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 ZNF614Q8N883 585 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 CCT8L2Q96SF2 557 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 CPPED1Q9BRF8 314 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-225ENST00000556798 CCDC106Q9BWC9 280 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 ZNF350Q9GZX5 532 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 UBQLN3Q9H347 655 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 UBQLN4Q9NRR5 601 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 FBXL2Q9UKC9 423 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 ADAM21Q9UKJ8 722 aa15.95■□□□□ 0.14
SHMT2-225ENST00000556798 CENPVL1A0A0U1RR11 272 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 ALG1L2C9J202 215 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 SCDO00767 359 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 MRASO14807 208 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 SLC22A2O15244 555 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 GMFGO60234 142 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 SHOX2O60902 331 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-225ENST00000556798 STX11O75558 287 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 TRAPPC6AO75865 159 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 H6PDO95479 791 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 NGFRP08138 427 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 CHRM4P08173 479 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 LCN1P31025 176 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 TXNL4AP83876 142 aaKnown RBP15.94■□□□□ 0.14
SHMT2-225ENST00000556798 HPCAP84074 193 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 ELOAQ14241 798 aaKnown RBP15.94■□□□□ 0.14
SHMT2-225ENST00000556798 CAPRIN1Q14444 709 aaKnown RBP15.94■□□□□ 0.14
SHMT2-225ENST00000556798 RGNQ15493 299 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 KRTCAP3Q53RY4 240 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 FRRS1Q6ZNA5 592 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 PLCZ1Q86YW0 608 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 TREML1Q86YW5 311 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 SPPL2CQ8IUH8 684 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 SLC39A3Q9BRY0 314 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 MYLK2Q9H1R3 596 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 SLC6A15Q9H2J7 730 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 RAD21L1Q9H4I0 556 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 MED11Q9P086 117 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 KCNE5Q9UJ90 142 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 WDR45Q9Y484 360 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 RELNP78509 3460 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 HIVEP3Q5T1R4 2406 aa15.94■□□□□ 0.14
SHMT2-225ENST00000556798 MYO18BQ8IUG5 2567 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 A0A1B0GTH9 108 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 NPIPB9F8W1W9 429 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 NDUFB5O43674 189 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 KIAA0513O60268 411 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 TNFRSF21O75509 655 aa15.93■□□□□ 0.14
SHMT2-225ENST00000556798 NR2F1P10589 423 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms