RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ZNF347Q96SE7 839 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 ADOQ96SZ5 270 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 SECISBP2Q96T21 854 aaKnown RBP8.5□□□□□ -1.05
ACTN1-218ENST00000556343 SEPHS2Q99611 448 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 TBL1XR1Q9BZK7 514 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 ZBTB20Q9HC78 741 aaPredicted RBP8.5□□□□□ -1.05
ACTN1-218ENST00000556343 SDHAF3Q9NRP4 125 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 ARMC1Q9NVT9 282 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 HPF1Q9NWY4 346 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 STMN3Q9NZ72 180 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF223Q9UK11 482 aaPredicted RBP8.5□□□□□ -1.05
ACTN1-218ENST00000556343 DTNAQ9Y4J8 743 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 FER1L5A0AVI2 2057 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 SPEGQ15772 3267 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 TCRBV5S2A0A599 114 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ARGFXA6NJG6 315 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 GNGT2O14610 69 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 AP3D1O14617 1153 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 NKX2-8O15522 239 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 PRKNO60260 465 aaPredicted RBP8.49□□□□□ -1.05
ACTN1-218ENST00000556343 MGRN1O60291 552 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ENTPD5O75356 428 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ITGA10O75578 1167 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 OR2J2O76002 312 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 LGI1O95970 557 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 IFNW1P05000 195 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 FABP3P05413 133 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 NGFRP08138 427 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 FBXO45P0C2W1 286 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 PRKAR1AP10644 381 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ITGAMP11215 1152 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 CYP4B1P13584 511 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 NID1P14543 1247 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 TBXA2RP21731 343 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 FASP25445 335 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ADH7P40394 386 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ARHGDIAP52565 204 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 SOX8P57073 446 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 SMIM11AP58511 58 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 KCNJ10P78508 379 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 CDC20Q12834 499 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ACER2Q5QJU3 275 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 RNF220Q5VTB9 566 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 AGAP7PQ5VUJ5 663 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF550Q7Z398 422 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 PRR22Q8IZ63 422 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ADGRG5Q8IZF4 528 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ARMC10Q8N2F6 343 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 SMYD1Q8NB12 490 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 BRIX1Q8TDN6 353 aaKnown RBP8.49□□□□□ -1.05
ACTN1-218ENST00000556343 CANT1Q8WVQ1 401 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 SLC35B4Q969S0 331 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 SPACA9Q96E40 222 aaPredicted RBP8.49□□□□□ -1.05
ACTN1-218ENST00000556343 HSH2DQ96JZ2 352 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 AGAP4Q96P64 663 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 RASL10BQ96S79 203 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 CHID1Q9BWS9 393 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ING2Q9H160 280 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 RUBCNLQ9H714 662 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 LIN28AQ9H9Z2 209 aaKnown RBP8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ABCG2Q9UNQ0 655 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF443Q9Y2A4 671 aaPredicted RBP8.49□□□□□ -1.05
ACTN1-218ENST00000556343 SH3GLB1Q9Y371 365 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 PTPRBP23467 1997 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 DSPPQ9NZW4 1301 aa8.49□□□□□ -1.05
ACTN1-218ENST00000556343 CFAP54Q96N23 3096 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 A0A1W2PQD3 144 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 SERINC4A6NH21 518 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 TMEM200CA6NKL6 621 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 EFSO43281 561 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 NDUFB5O43674 189 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 EIF4E2O60573 245 aaKnown RBP8.48□□□□□ -1.05
ACTN1-218ENST00000556343 DEAF1O75398 565 aaPredicted RBP8.48□□□□□ -1.05
ACTN1-218ENST00000556343 GCM2O75603 506 aaPredicted RBP8.48□□□□□ -1.05
ACTN1-218ENST00000556343 UGT2B17O75795 530 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 CSTAP01040 98 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 OPN1SWP03999 348 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 CELA2AP08217 269 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 RPS4Y1P22090 263 aaKnown RBP8.48□□□□□ -1.05
ACTN1-218ENST00000556343 CYB561P49447 251 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 COPZ1P61923 177 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 SNTA1Q13424 505 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 NTRK2Q16620 822 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 DUSP7Q16829 419 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 GRAMD1BQ3KR37 738 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 PDZK1Q5T2W1 519 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 RANBP3LQ86VV4 465 aaPredicted RBP8.48□□□□□ -1.05
ACTN1-218ENST00000556343 CARM1Q86X55 608 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 ZDHHC21Q8IVQ6 265 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 SIRT6Q8N6T7 355 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 PAPD5Q8NDF8 572 aaKnown RBP8.48□□□□□ -1.05
ACTN1-218ENST00000556343 PYDC1Q8WXC3 89 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 LMF1Q96S06 567 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 MESP1Q9BRJ9 268 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 BDH2Q9BUT1 245 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 POLR2J2Q9GZM3 115 aaKnown RBP8.48□□□□□ -1.05
ACTN1-218ENST00000556343 POLR2J3Q9H1A7 115 aaKnown RBP8.48□□□□□ -1.05
ACTN1-218ENST00000556343 METTL7AQ9H8H3 244 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 IL1RAPQ9NPH3 570 aa8.48□□□□□ -1.05
ACTN1-218ENST00000556343 FBXO34Q9NWN3 711 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms