RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SHBGP04278 402 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 CD8BP10966 210 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 PRPS2P11908 318 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 CPA3P15088 417 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 ZNF17P17021 662 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 HOXB4P17483 251 aaPredicted RBP17.76■□□□□ 0.43
PRKCH-219ENST00000555906 HOXC12P31275 282 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 GABRA3P34903 492 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 GPC1P35052 558 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 MAP3K8P41279 467 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 CLDN20P56880 219 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 SIRPAP78324 504 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 C17orf67Q0P5P2 114 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 PON3Q15166 354 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 TMEM44Q2T9K0 475 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 GRAMD1BQ3KR37 738 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 VPS26BQ4G0F5 336 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 ZNF474Q6S9Z5 364 aaPredicted RBP17.76■□□□□ 0.43
PRKCH-219ENST00000555906 KRTAP1-3Q8IUG1 177 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 CCDC63Q8NA47 563 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 OR5M1Q8NGP8 315 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 DUSP19Q8WTR2 217 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 ZNF845Q96IR2 970 aaPredicted RBP17.76■□□□□ 0.43
PRKCH-219ENST00000555906 MS4A4EQ96PG1 132 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 FAM111AQ96PZ2 611 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 IQCGQ9H095 443 aaKnown RBP17.76■□□□□ 0.43
PRKCH-219ENST00000555906 OPN3Q9H1Y3 402 aaPredicted RBP17.76■□□□□ 0.43
PRKCH-219ENST00000555906 ZNF226Q9NYT6 803 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 PTGDR2Q9Y5Y4 395 aa17.76■□□□□ 0.43
PRKCH-219ENST00000555906 GXYLT2A0PJZ3 443 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 DEFB108AA8MXU0 73 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 COPEO14579 308 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 SIAH2O43255 324 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 NKX2-2O95096 273 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 CGAP01215 116 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 IGKV1D-16P01601 117 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 NGFRP08138 427 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 POU2F1P14859 743 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 SDC1P18827 310 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 CRYGSP22914 178 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 UGT2B10P36537 528 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 FRKP42685 505 aaPredicted RBP17.75■□□□□ 0.43
PRKCH-219ENST00000555906 PDE7AQ13946 482 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 APOOLQ6UXV4 268 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 GGNQ86UU5 652 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 CXorf67Q86X51 503 aaPredicted RBP17.75■□□□□ 0.43
PRKCH-219ENST00000555906 CDRT4Q8N9R6 151 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 GPR151Q8TDV0 419 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 PIK3R3Q92569 461 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 CIDECQ96AQ7 238 aaPredicted RBP17.75■□□□□ 0.43
PRKCH-219ENST00000555906 ZBED6CLQ96FA7 236 aaPredicted RBP17.75■□□□□ 0.43
PRKCH-219ENST00000555906 SLC39A3Q9BRY0 314 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 MED18Q9BUE0 208 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 REEP4Q9H6H4 257 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 KLHL28Q9NXS3 571 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 C6orf203Q9P0P8 240 aaPredicted RBP17.75■□□□□ 0.43
PRKCH-219ENST00000555906 NTMQ9P121 344 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 ARID1AO14497 2285 aa17.75■□□□□ 0.43
PRKCH-219ENST00000555906 ALG1L2C9J202 215 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 AZIN1O14977 448 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 ZNF385BQ569K4 471 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 SHEQ5VZ18 495 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 ANKRD26P1Q6NSI1 321 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 BIVMQ86UB2 503 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 OR2T11Q8NH01 316 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 CEP70Q8NHQ1 597 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 UBLCP1Q8WVY7 318 aaPredicted RBP17.74■□□□□ 0.43
PRKCH-219ENST00000555906 CAVIN3Q969G5 261 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 PPCDCQ96CD2 204 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 WFIKKN1Q96NZ8 548 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 TRMOQ9BU70 441 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 GSX1Q9H4S2 264 aaPredicted RBP17.74■□□□□ 0.43
PRKCH-219ENST00000555906 STOML1Q9UBI4 398 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 TMED5Q9Y3A6 229 aa17.74■□□□□ 0.43
PRKCH-219ENST00000555906 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 A0A087WZY1 265 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 OXSR1O95747 527 aaPredicted RBP17.73■□□□□ 0.43
PRKCH-219ENST00000555906 CHEK2O96017 543 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 KRT4P19013 534 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 RPL38P63173 70 aaKnown RBP17.73■□□□□ 0.43
PRKCH-219ENST00000555906 PCLAFQ15004 111 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.73■□□□□ 0.43
PRKCH-219ENST00000555906 KANK2Q63ZY3 851 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 Q6ZSR9 355 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 HOMEZQ8IX15 550 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 EPS8L3Q8TE67 593 aaKnown RBP17.73■□□□□ 0.43
PRKCH-219ENST00000555906 GIMAP5Q96F15 307 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 TSSK3Q96PN8 268 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 PIP5K1AQ99755 562 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 C12orf65Q9H3J6 166 aaKnown RBP17.73■□□□□ 0.43
PRKCH-219ENST00000555906 TUBB1Q9H4B7 451 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 ACSS1Q9NUB1 689 aaPredicted RBP17.73■□□□□ 0.43
PRKCH-219ENST00000555906 PROCRQ9UNN8 238 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 VDAC3Q9Y277 283 aa17.73■□□□□ 0.43
PRKCH-219ENST00000555906 DSCAMO60469 2012 aa17.72■□□□□ 0.43
PRKCH-219ENST00000555906 C7orf72A4D263 438 aa17.72■□□□□ 0.43
PRKCH-219ENST00000555906 SMIM23A6NLE4 172 aa17.72■□□□□ 0.43
PRKCH-219ENST00000555906 C16orf97H3BN30 126 aa17.72■□□□□ 0.43
PRKCH-219ENST00000555906 LSM1O15116 133 aaKnown RBP17.72■□□□□ 0.43
PRKCH-219ENST00000555906 ACP2P11117 423 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms