RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 OR5P2Q8WZ92 322 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 PAIP2Q9BPZ3 127 aaKnown RBP16.68■□□□□ 0.26
NEDD1-208ENST00000555806 SIRT3Q9NTG7 399 aaPredicted RBP16.68■□□□□ 0.26
NEDD1-208ENST00000555806 RAP2CQ9Y3L5 183 aa16.68■□□□□ 0.26
NEDD1-208ENST00000555806 EEF1E1-BLOC1S5C9J1V9 151 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 EEF1E1O43324 174 aaKnown RBP16.67■□□□□ 0.26
NEDD1-208ENST00000555806 KCNK2O95069 426 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 C6orf47O95873 294 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 DHRS4L1P0CG22 281 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 TMIGD3P0DMS9 266 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-208ENST00000555806 G6PDP11413 515 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 ZNF708P17019 499 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 POU3F2P20265 443 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-208ENST00000555806 OPRM1P35372 400 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 SLC1A6P48664 564 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 CLDN18P56856 261 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 B3GALT5-AS1P59052 145 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 C17orf67Q0P5P2 114 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 TP53BP2Q13625 1128 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 LASP1Q14847 261 aaKnown RBP16.67■□□□□ 0.26
NEDD1-208ENST00000555806 LSM12Q3MHD2 195 aaKnown RBP16.67■□□□□ 0.26
NEDD1-208ENST00000555806 ZCCHC12Q6PEW1 402 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 PLXDC2Q6UX71 529 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 CHMP1BQ7LBR1 199 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 TMEM200AQ86VY9 491 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 GRAMD2AQ8IUY3 354 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 UBQLNLQ8IYU4 475 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 NATD1Q8N6N6 113 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 NUDT8Q8WV74 236 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 TM9SF2Q99805 663 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 NOP53Q9NZM5 478 aaKnown RBP16.67■□□□□ 0.26
NEDD1-208ENST00000555806 L3MBTL1Q9Y468 752 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 ACTL7BQ9Y614 415 aa16.67■□□□□ 0.26
NEDD1-208ENST00000555806 SYT5O00445 386 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 CFLARO15519 480 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 OXSR1O95747 527 aaPredicted RBP16.66■□□□□ 0.26
NEDD1-208ENST00000555806 HMGN2P05204 90 aaKnown RBP16.66■□□□□ 0.26
NEDD1-208ENST00000555806 PEPDP12955 493 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 CAPN3P20807 821 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 CCT3P49368 545 aaKnown RBP16.66■□□□□ 0.26
NEDD1-208ENST00000555806 RPL14P50914 215 aaKnown RBP16.66■□□□□ 0.26
NEDD1-208ENST00000555806 DIO3P55073 304 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 POU6F2P78424 691 aaPredicted RBP16.66■□□□□ 0.26
NEDD1-208ENST00000555806 EMX2Q04743 252 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 MPP2Q14168 576 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 TNFAIP8L3Q5GJ75 292 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 CCNJQ5T5M9 372 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 POMZP3Q6PJE2 187 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 APOOLQ6UXV4 268 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 MEIOBQ8N635 442 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 ANKRD42Q8N9B4 389 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 GATSQ8NAP1 163 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 OR56A1Q8NGH5 318 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 OR5M1Q8NGP8 315 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 RNASE6Q93091 150 aaKnown RBP16.66■□□□□ 0.26
NEDD1-208ENST00000555806 C1GALT1C1Q96EU7 318 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 PGM2Q96G03 612 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 SH3GL2Q99962 352 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 G6PC3Q9BUM1 346 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 DUSP26Q9BV47 211 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 C20orf27Q9GZN8 174 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 CXorf36Q9H7Y0 433 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 CLCF1Q9UBD9 225 aa16.66■□□□□ 0.26
NEDD1-208ENST00000555806 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.66■□□□□ 0.26
NEDD1-208ENST00000555806 NDUFB5O43674 189 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 SNUPNO95149 360 aaKnown RBP16.65■□□□□ 0.26
NEDD1-208ENST00000555806 IL18BPO95998 194 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 HPGDP15428 266 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 SOAT1P35610 550 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 PEX19P40855 299 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 KIR2DL3P43628 341 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 STX3Q13277 289 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 BCL2A1Q16548 175 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.65■□□□□ 0.26
NEDD1-208ENST00000555806 PGS1Q32NB8 556 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 HHATQ5VTY9 493 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 P4HA3Q7Z4N8 544 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 ZAR1Q86SH2 424 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 RIMKLAQ8IXN7 391 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 ZZZ3Q8IYH5 903 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 KIRREL3Q8IZU9 778 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 FAM110BQ8TC76 370 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 SMPDL3BQ92485 455 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 CDS1Q92903 461 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 WNT2BQ93097 391 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 INTS12Q96CB8 462 aaKnown RBP16.65■□□□□ 0.26
NEDD1-208ENST00000555806 COQ8BQ96D53 544 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 DOCK7Q96N67 2140 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 ZFP3Q96NJ6 502 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 STACQ99469 402 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 SORT1Q99523 831 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 PIGQQ9BRB3 760 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 BTBD2Q9BX70 525 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 BHLHE41Q9C0J9 482 aaPredicted RBP16.65■□□□□ 0.26
NEDD1-208ENST00000555806 AKTIPQ9H8T0 292 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 NEUROD4Q9HD90 331 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 ITGB1BP2Q9UKP3 347 aa16.65■□□□□ 0.26
NEDD1-208ENST00000555806 FAF1Q9UNN5 650 aaPredicted RBP16.65■□□□□ 0.26
NEDD1-208ENST00000555806 IGLV3-32A0A0A0MS00 114 aa16.64■□□□□ 0.25
NEDD1-208ENST00000555806 OR2M5A3KFT3 312 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms