RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 FBXO30Q8TB52 745 aa13.94□□□□□ -0.18
SNX6-205ENST00000555648 PINK1Q9BXM7 581 aa13.94□□□□□ -0.18
SNX6-205ENST00000555648 PRRG4Q9BZD6 226 aa13.94□□□□□ -0.18
SNX6-205ENST00000555648 ROPN1BQ9BZX4 212 aaPredicted RBP13.94□□□□□ -0.18
SNX6-205ENST00000555648 TUBB1Q9H4B7 451 aa13.94□□□□□ -0.18
SNX6-205ENST00000555648 ROPN1Q9HAT0 212 aaPredicted RBP13.94□□□□□ -0.18
SNX6-205ENST00000555648 EIF3LQ9Y262 564 aaKnown RBP13.94□□□□□ -0.18
SNX6-205ENST00000555648 ZNF337Q9Y3M9 751 aa13.94□□□□□ -0.18
SNX6-205ENST00000555648 AP4B1Q9Y6B7 739 aa13.94□□□□□ -0.18
SNX6-205ENST00000555648 OR2M5A3KFT3 312 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 SH3D21A4FU49 640 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 A8MXE2 369 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 SCDO00767 359 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 MSTNO14793 375 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 PIP5K1BO14986 540 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 TNFRSF21O75509 655 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 NKX2-2O95096 273 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 NUDT17P0C025 328 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 BCKDHAP12694 445 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 SERPINB5P36952 375 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 KCNJ5P48544 419 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 SERPINB4P48594 390 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 SIRPAP78324 504 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 FGFBP1Q14512 234 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 SPDYE7PQ495Y7 208 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 ATP6AP1LQ52LC2 224 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 ZNF385BQ569K4 471 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 ZCCHC12Q6PEW1 402 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 FIGNL1Q6PIW4 674 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 CAMKMTQ7Z624 323 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 COX18Q8N8Q8 333 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 TCP10LQ8TDR4 215 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 ZNF845Q96IR2 970 aaPredicted RBP13.93□□□□□ -0.18
SNX6-205ENST00000555648 FCRL1Q96LA6 429 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 PRPF18Q99633 342 aaKnown RBP13.93□□□□□ -0.18
SNX6-205ENST00000555648 SLC39A3Q9BRY0 314 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 MECRQ9BV79 373 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 LIME1Q9H400 295 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 ANKZF1Q9H8Y5 726 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 ZCCHC3Q9NUD5 404 aaKnown RBP13.93□□□□□ -0.18
SNX6-205ENST00000555648 ATAD3AQ9NVI7 634 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 SLC17A7Q9P2U7 560 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 VDAC3Q9Y277 283 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 SNX8Q9Y5X2 465 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 F8P00451 2351 aa13.93□□□□□ -0.18
SNX6-205ENST00000555648 A0A087WZY1 265 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 A0A1W2PRB8 838 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 TMEM233B4DJY2 109 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 PEX11AO75192 247 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 SLU7O95391 586 aaKnown RBP13.92□□□□□ -0.18
SNX6-205ENST00000555648 HSPA4LO95757 839 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 RAF1P04049 648 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 FCGR2AP12318 317 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 CD99P14209 185 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 EFNA1P20827 205 aaPredicted RBP13.92□□□□□ -0.18
SNX6-205ENST00000555648 ATP6V1C1P21283 382 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 ZNF41P51814 821 aaPredicted RBP13.92□□□□□ -0.18
SNX6-205ENST00000555648 VSNL1P62760 191 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 PDE7AQ13946 482 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 PON3Q15166 354 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 POU4F3Q15319 338 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 CPTPQ5TA50 214 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 GALNT10Q86SR1 603 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 MISPQ8IVT2 679 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 GATSQ8NAP1 163 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 FNDC5Q8NAU1 212 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 FIG4Q92562 907 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 PGM2Q96G03 612 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 RTN4RQ9BZR6 473 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 LGALS13Q9UHV8 139 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 FAF1Q9UNN5 650 aaPredicted RBP13.92□□□□□ -0.18
SNX6-205ENST00000555648 ZNF175Q9Y473 711 aa13.92□□□□□ -0.18
SNX6-205ENST00000555648 IGLV3-32A0A0A0MS00 114 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 B4DXG7 233 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 ALG1L2C9J202 215 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 EIF1AYO14602 144 aaKnown RBP13.91□□□□□ -0.18
SNX6-205ENST00000555648 SCAMP2O15127 329 aaKnown RBP13.91□□□□□ -0.18
SNX6-205ENST00000555648 LYPLA1O75608 230 aaPredicted RBP13.91□□□□□ -0.18
SNX6-205ENST00000555648 TNFSF13O75888 250 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 KCNK2O95069 426 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 OXSR1O95747 527 aaPredicted RBP13.91□□□□□ -0.18
SNX6-205ENST00000555648 PLGP00747 810 aaPredicted RBP13.91□□□□□ -0.18
SNX6-205ENST00000555648 IGKV1D-16P01601 117 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 KRT16P08779 473 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 ACP2P11117 423 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 TBXA2RP21731 343 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 ME2P23368 584 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 LCN1P31025 176 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 FRKP42685 505 aaPredicted RBP13.91□□□□□ -0.18
SNX6-205ENST00000555648 EIF1AXP47813 144 aaKnown RBP13.91□□□□□ -0.18
SNX6-205ENST00000555648 SUCLG1P53597 346 aaKnown RBP13.91□□□□□ -0.18
SNX6-205ENST00000555648 CLDN15P56746 228 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 POU6F2P78424 691 aaPredicted RBP13.91□□□□□ -0.18
SNX6-205ENST00000555648 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.91□□□□□ -0.18
SNX6-205ENST00000555648 LSM12Q3MHD2 195 aaKnown RBP13.91□□□□□ -0.18
SNX6-205ENST00000555648 MFSD12Q6NUT3 480 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 EMBQ6PCB8 327 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 PAMR1Q6UXH9 720 aa13.91□□□□□ -0.18
SNX6-205ENST00000555648 ZCCHC23Q6ZST2 131 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms