RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 GOLGA8OA6NCC3 632 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 AHRRA9YTQ3 701 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 GOLGA8NF8WBI6 632 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 HDAC3O15379 428 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 CFLARO15519 480 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 SCN2BO60939 215 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 OXSR1O95747 527 aaPredicted RBP18.6■□□□□ 0.57
VTI1B-205ENST00000555543 ACTL6AO96019 429 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 EPHA3P29320 983 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 B3GALT5-AS1P59052 145 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.6■□□□□ 0.57
VTI1B-205ENST00000555543 RIPPLY2Q5TAB7 128 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 CDC73Q6P1J9 531 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 MAVSQ7Z434 540 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 TRIM42Q8IWZ5 723 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 NAXEQ8NCW5 288 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 OR8J2Q8NGG1 315 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 DUSP19Q8WTR2 217 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 TEX37Q96LM6 180 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 STACQ99469 402 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 TBL1XR1Q9BZK7 514 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 PIGUQ9H490 435 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 NPDC1Q9NQX5 325 aaPredicted RBP18.6■□□□□ 0.57
VTI1B-205ENST00000555543 DUSP22Q9NRW4 184 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 KCNE3Q9Y6H6 103 aa18.6■□□□□ 0.57
VTI1B-205ENST00000555543 RNASET2O00584 256 aaKnown RBP18.59■□□□□ 0.57
VTI1B-205ENST00000555543 ANGPTL1O95841 491 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 EPPINO95925 133 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 COX6B1P14854 86 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 SOAT1P35610 550 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 ZFP36L2P47974 494 aaKnown RBP18.59■□□□□ 0.57
VTI1B-205ENST00000555543 STARP49675 285 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 DSCR4P56555 118 aaPredicted RBP18.59■□□□□ 0.57
VTI1B-205ENST00000555543 NME5P56597 212 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 POU6F2P78424 691 aaPredicted RBP18.59■□□□□ 0.57
VTI1B-205ENST00000555543 ANKRD46Q86W74 232 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 CLEC4FQ8N1N0 589 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 ACBD4Q8NC06 268 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 TNIP2Q8NFZ5 429 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 TESCQ96BS2 214 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 CHMP6Q96FZ7 201 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 ATP6V1G3Q96LB4 118 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 SFXN2Q96NB2 322 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 BTBD2Q9BX70 525 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 ACTRT3Q9BYD9 372 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 SERHL2Q9H4I8 314 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 AIG1Q9NVV5 245 aa18.59■□□□□ 0.57
VTI1B-205ENST00000555543 MRPS18CQ9Y3D5 142 aaKnown RBP18.59■□□□□ 0.57
VTI1B-205ENST00000555543 CSMD1Q96PZ7 3565 aa18.58■□□□□ 0.57
VTI1B-205ENST00000555543 TACC2O95359 2948 aa18.58■□□□□ 0.57
VTI1B-205ENST00000555543 IGLV3-32A0A0A0MS00 114 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 ALG1L2C9J202 215 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 C9JVG2 144 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 KLF11O14901 512 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 NGFRP08138 427 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 CPN1P15169 458 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 H2AFXP16104 143 aaPredicted RBP18.58■□□□□ 0.56
VTI1B-205ENST00000555543 GCKP35557 465 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 CLK3P49761 638 aaKnown RBP18.58■□□□□ 0.56
VTI1B-205ENST00000555543 LHX2P50458 406 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 RPS26P62854 115 aaKnown RBP18.58■□□□□ 0.56
VTI1B-205ENST00000555543 SPANXN4Q5MJ08 99 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 NSUN5P2Q63ZY6 315 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 LACC1Q8IV20 430 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 MCEMP1Q8IX19 187 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 GATSQ8NAP1 163 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 ZNF75CPQ92670 426 aaPredicted RBP18.58■□□□□ 0.56
VTI1B-205ENST00000555543 TRIB1Q96RU8 372 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 TUBA1CQ9BQE3 449 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 G6PC3Q9BUM1 346 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 TRIM8Q9BZR9 551 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 SDHAF3Q9NRP4 125 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 GIN1Q9NXP7 522 aa18.58■□□□□ 0.56
VTI1B-205ENST00000555543 FAF1Q9UNN5 650 aaPredicted RBP18.58■□□□□ 0.56
VTI1B-205ENST00000555543 HCFC1P51610 2035 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 PCNX3Q9H6A9 2034 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 TRPC5OSA6NMA1 111 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 GMFGO60234 142 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 TBXA2RP21731 343 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 IL12AP29459 219 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 CEACAM8P31997 349 aaPredicted RBP18.57■□□□□ 0.56
VTI1B-205ENST00000555543 CLDN18P56856 261 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 UFM1P61960 85 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 SRYQ05066 204 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 SLC9B1Q4ZJI4 515 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 AAGABQ6PD74 315 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 ENPP6Q6UWR7 440 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 PLXDC2Q6UX71 529 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 OR5D16Q8NGK9 328 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 OR4A15Q8NGL6 344 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 ADAMTS15Q8TE58 950 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 MOAP1Q96BY2 351 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 C1GALT1C1Q96EU7 318 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 DTNBP1Q96EV8 351 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 SH3GL2Q99962 352 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 ENKD1Q9H0I2 346 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 KCNJ16Q9NPI9 418 aa18.57■□□□□ 0.56
VTI1B-205ENST00000555543 NPIPA5A0A0B4J1W7 369 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 RNF103-CHMP3A0A140T963 221 aa18.56■□□□□ 0.56
VTI1B-205ENST00000555543 CD8B2A6NJW9 211 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms