RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 ACOT1Q86TX2 421 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 VSTM4Q8IW00 320 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 CDH26Q8IXH8 852 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 TMEM123Q8N131 208 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 CLDN19Q8N6F1 224 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 ZSCAN4Q8NAM6 433 aaPredicted RBP4.4□□□□□ -1.71
PSEN1-211ENST00000554995 RFESDQ8TAC1 157 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 NPRL2Q8WTW4 380 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 PIGCQ92535 297 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 SDSLQ96GA7 329 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 POM121L2Q96KW2 1035 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 ZNF597Q96LX8 424 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 AMDHD1Q96NU7 426 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 NPAS2Q99743 824 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 OPRPNQ99935 248 aaPredicted RBP4.4□□□□□ -1.71
PSEN1-211ENST00000554995 ATF6BQ99941 703 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 TMEM43Q9BTV4 400 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 CRNKL1Q9BZJ0 848 aaKnown RBP4.4□□□□□ -1.71
PSEN1-211ENST00000554995 FANCFQ9NPI8 374 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 MEPEQ9NQ76 525 aaPredicted RBP4.4□□□□□ -1.71
PSEN1-211ENST00000554995 ABCC13Q9NSE7 274 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 PIPOXQ9P0Z9 390 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 RCOR3Q9P2K3 495 aaPredicted RBP4.4□□□□□ -1.71
PSEN1-211ENST00000554995 CRLS1Q9UJA2 301 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 BARX2Q9UMQ3 279 aaPredicted RBP4.4□□□□□ -1.71
PSEN1-211ENST00000554995 UNC13AQ9UPW8 1703 aa4.4□□□□□ -1.71
PSEN1-211ENST00000554995 XKRY2A2RUG3 117 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 FOXI3A8MTJ6 420 aaPredicted RBP4.39□□□□□ -1.71
PSEN1-211ENST00000554995 ARHGEF9O43307 516 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 TPST2O60704 377 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 ZG16O60844 167 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 F10P00742 488 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 CAPN1P07384 714 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 PGCP20142 388 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 LAP3P28838 519 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 HPCAL1P37235 193 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 GRIA1P42261 906 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 CSRP3P50461 194 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 ARHGDIAP52565 204 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 CRIP2P52943 208 aaPredicted RBP4.39□□□□□ -1.71
PSEN1-211ENST00000554995 CSTF1Q05048 431 aaKnown RBP4.39□□□□□ -1.71
PSEN1-211ENST00000554995 ELAVL3Q14576 367 aaKnown RBP4.39□□□□□ -1.71
PSEN1-211ENST00000554995 KCTD21Q4G0X4 260 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 C14orf28Q4W4Y0 310 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 C2CD6Q53TS8 623 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 ZSCAN25Q6NSZ9 544 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 ARMCX5Q6P1M9 558 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 EMBQ6PCB8 327 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 RFWD3Q6PCD5 774 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 STAC2Q6ZMT1 411 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 BEST4Q8NFU0 473 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 STXBP6Q8NFX7 210 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 MIPOL1Q8TD10 442 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 FBXO32Q969P5 355 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 PELI1Q96FA3 418 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 TGM7Q96PF1 710 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 CHCHD5Q9BSY4 110 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 SYT11Q9BT88 431 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 FN3KRPQ9HA64 309 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 UFSP2Q9NUQ7 469 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 NMRK1Q9NWW6 199 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 HYPKQ9NX55 129 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 CTSZQ9UBR2 303 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 LCMT1Q9UIC8 334 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 RPH3ALQ9UNE2 315 aa4.39□□□□□ -1.71
PSEN1-211ENST00000554995 IGHV3OR16-12A0A075B7B8 117 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 TRAV26-1A0A087WT03 109 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 IGHV3-16A0A0C4DH30 117 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 TRABD2BA6NFA1 517 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 RPL37AP8A6NKH3 93 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 TSC22D2O75157 780 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 HBQ1P09105 142 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 TRIM49P0CI25 452 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 TRIM49CP0CI26 452 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 SDC1P18827 310 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 CEBPDP49716 269 aaPredicted RBP4.38□□□□□ -1.71
PSEN1-211ENST00000554995 ATP12AP54707 1039 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 BDH1Q02338 343 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 C17orf58Q2M2W7 97 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 C9orf66Q5T8R8 295 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 FAM71F2Q6NXP2 309 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 REG3GQ6UW15 175 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 Q6ZPB1 254 aaPredicted RBP4.38□□□□□ -1.71
PSEN1-211ENST00000554995 LINC01561Q8N1V8 128 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 ARL14Q8N4G2 192 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 OR5D13Q8NGL4 314 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 COQ2Q96H96 371 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 C12orf66Q96MD2 445 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 SLC6A7Q99884 636 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 TUBB1Q9H4B7 451 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 JPT2Q9H910 190 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 TM9SF3Q9HD45 589 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 SMOXQ9NWM0 555 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 AIPL1Q9NZN9 384 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 PCSK1NQ9UHG2 260 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 CTNNA3Q9UI47 895 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 RNF24Q9Y225 148 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 MAD1L1Q9Y6D9 718 aa4.38□□□□□ -1.71
PSEN1-211ENST00000554995 NACADO15069 1562 aa4.37□□□□□ -1.71
PSEN1-211ENST00000554995 A0A1W2PNV4 684 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms