RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SAMD12Q8N8I0 201 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 GANCQ8TET4 914 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 C2CD4CQ8TF44 421 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 ELP4Q96EB1 424 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 TCEAL4Q96EI5 215 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 MTG2Q9H4K7 406 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 FGF20Q9NP95 211 aaPredicted RBP14.68□□□□□ -0.06
SYNE3-203ENST00000554873 TVP23BQ9NYZ1 205 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 TRBV23-1A0A0A0MS06 115 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 A0A1B0GVC2 190 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 IRGMA1A4Y4 181 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 A6NIN4 97 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 FAM227AF5H4B4 570 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 SCAMP1O15126 338 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 GREM1O60565 184 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 CD3GP09693 182 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 CST5P28325 142 aaPredicted RBP14.68□□□□□ -0.06
SYNE3-203ENST00000554873 NR0B1P51843 470 aaKnown RBP14.68□□□□□ -0.06
SYNE3-203ENST00000554873 CASP9P55211 416 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 GAB1Q13480 694 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 SYT14P1Q58G82 188 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 SLC25A30Q5SVS4 291 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 IKBIPQ70UQ0 350 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 PGAP1Q75T13 922 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 VOPP1Q96AW1 172 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 KCTD12Q96CX2 325 aaKnown RBP14.68□□□□□ -0.06
SYNE3-203ENST00000554873 PAPOLGQ9BWT3 736 aaKnown RBP14.68□□□□□ -0.06
SYNE3-203ENST00000554873 ARL6Q9H0F7 186 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 RHCGQ9UBD6 479 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 CLEC4EQ9ULY5 219 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 RUVBL1Q9Y265 456 aaKnown RBP14.68□□□□□ -0.06
SYNE3-203ENST00000554873 EXOSC1Q9Y3B2 195 aaKnown RBP14.68□□□□□ -0.06
SYNE3-203ENST00000554873 C2orf92A0A1B0GVN3 265 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 SCAMP2O15127 329 aaKnown RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 SRPRAP08240 638 aaKnown RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 DRD5P21918 477 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 STARP49675 285 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 CTSCP53634 463 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 GAS1P54826 345 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 TNFRSF17Q02223 184 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 ACSM2AQ08AH3 577 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 FAM74A1Q5RGS3 127 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 AVPI1Q5T686 147 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 CPTPQ5TA50 214 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 ACSM2BQ68CK6 577 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF660Q6AZW8 331 aaPredicted RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 SERPINA13PQ6UXR4 307 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 LDLRAD3Q86YD5 345 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 FAM71CQ8NEG0 241 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 EDARADDQ8WWZ3 215 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF582Q96NG8 517 aaPredicted RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 POLDIP3Q9BY77 421 aaKnown RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 TAS2R3Q9NYW6 316 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 PLXNB3Q9ULL4 1909 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 HMSDA8MTL9 139 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 DISC1C4P0D8 188 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 MID1O15344 667 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 PRAMEF2O60811 474 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 AQP8O94778 261 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 ETHE1O95571 254 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 MT-ND4P03905 459 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 CSNK1DP48730 415 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 PSMD4P55036 377 aaKnown RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 RAE1P78406 368 aaKnown RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 RAB40BQ12829 278 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 SNTB1Q13884 538 aaKnown RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 SGCAQ16586 387 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 LIPJQ5W064 366 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 IL20RBQ6UXL0 311 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 TPRG1Q6ZUI0 275 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 USP53Q70EK8 1073 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 LYSMD1Q96S90 227 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 TSNAXQ99598 290 aaKnown RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 WDR26Q9H7D7 661 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF334Q9HCZ1 680 aaPredicted RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 MRPS18AQ9NVS2 196 aaKnown RBP14.67□□□□□ -0.06
SYNE3-203ENST00000554873 NKIRAS2Q9NYR9 191 aa14.67□□□□□ -0.06
SYNE3-203ENST00000554873 IGLV3-16A0A075B6K0 115 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 TTLL8A6PVC2 850 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 ARPC5O15511 151 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 SERPINA3P01011 423 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 MPC1LP0DKB6 136 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 SDHBP21912 280 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 SOX18P35713 384 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 C21orf58P58505 322 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 SNTB2Q13425 540 aaKnown RBP14.66□□□□□ -0.06
SYNE3-203ENST00000554873 SYTL3Q4VX76 610 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 ADNP2Q6IQ32 1131 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 SVBPQ8N300 66 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 LRR1Q96L50 414 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 C11orf49Q9H6J7 331 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 ELAC1Q9H777 363 aaKnown RBP14.66□□□□□ -0.06
SYNE3-203ENST00000554873 TEX10Q9NXF1 929 aaPredicted RBP14.66□□□□□ -0.06
SYNE3-203ENST00000554873 NTMQ9P121 344 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 ACSL6Q9UKU0 697 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 ANAPC1Q9H1A4 1944 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 HTTP42858 3142 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 OR2M5A3KFT3 312 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 CD8B2A6NJW9 211 aa14.66□□□□□ -0.06
SYNE3-203ENST00000554873 ARHGEF33A8MVX0 844 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms