RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 NAXDQ8IW45 347 aa4.03□□□□□ -1.76
CHD8-207ENST00000554384 POM121L12Q8N7R1 296 aa4.03□□□□□ -1.76
CHD8-207ENST00000554384 FAM71CQ8NEG0 241 aa4.03□□□□□ -1.76
CHD8-207ENST00000554384 FLVCR1-AS1Q8TAF5 88 aa4.03□□□□□ -1.76
CHD8-207ENST00000554384 NCLNQ969V3 563 aa4.03□□□□□ -1.76
CHD8-207ENST00000554384 C14orf79Q96F83 325 aa4.03□□□□□ -1.76
CHD8-207ENST00000554384 NMNAT2Q9BZQ4 307 aa4.03□□□□□ -1.76
CHD8-207ENST00000554384 LIN28AQ9H9Z2 209 aaKnown RBP4.03□□□□□ -1.76
CHD8-207ENST00000554384 MBD2Q9UBB5 411 aa4.03□□□□□ -1.76
CHD8-207ENST00000554384 PURGQ9UJV8 347 aaKnown RBP4.03□□□□□ -1.76
CHD8-207ENST00000554384 MRPL11Q9Y3B7 192 aaKnown RBP4.03□□□□□ -1.76
CHD8-207ENST00000554384 MTF2Q9Y483 593 aaPredicted RBP4.03□□□□□ -1.76
CHD8-207ENST00000554384 TIAM2Q8IVF5 1701 aa4.03□□□□□ -1.76
CHD8-207ENST00000554384 UNC80Q8N2C7 3258 aa4.03□□□□□ -1.77
CHD8-207ENST00000554384 DOT1LQ8TEK3 1739 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 BUB1O43683 1085 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 ZNF253O75346 499 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 DIRAS3O95661 229 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 IFNB1P01574 187 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 IGHV3-9P01782 118 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 GSTA1P08263 222 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 GP9P14770 177 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 PAICSP22234 425 aaKnown RBP4.02□□□□□ -1.77
CHD8-207ENST00000554384 IDSP22304 550 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 PTPN6P29350 595 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 ASMTP46597 345 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 HTR5AP47898 357 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 NUMBP49757 651 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 GPC3P51654 580 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 ARHGDIAP52565 204 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 SMC1AQ14683 1233 aaKnown RBP4.02□□□□□ -1.77
CHD8-207ENST00000554384 SHROOM1Q2M3G4 852 aaPredicted RBP4.02□□□□□ -1.77
CHD8-207ENST00000554384 PARP6Q2NL67 630 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 KRTAP27-1Q3LI81 207 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 ACSF3Q4G176 576 aaPredicted RBP4.02□□□□□ -1.77
CHD8-207ENST00000554384 SLC22A6Q4U2R8 563 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 FAM182AQ5T1J6 154 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 C12orf60Q5U649 245 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 OLFM4Q6UX06 510 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 MYPOPQ86VE0 399 aaPredicted RBP4.02□□□□□ -1.77
CHD8-207ENST00000554384 CCDC36Q8IYA8 594 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 DEFB123Q8N688 67 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 ANKRD20A12PQ8NF67 263 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 FAM222BQ8WU58 562 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 CRYGNQ8WXF5 182 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 DNAJA3Q96EY1 480 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 PIWIL1Q96J94 861 aaKnown RBP4.02□□□□□ -1.77
CHD8-207ENST00000554384 FAM173AQ9BQD7 235 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 RBM24Q9BX46 236 aaKnown RBP4.02□□□□□ -1.77
CHD8-207ENST00000554384 UBXN6Q9BZV1 441 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 RWDD1Q9H446 243 aaPredicted RBP4.02□□□□□ -1.77
CHD8-207ENST00000554384 KAT8Q9H7Z6 458 aaKnown RBP4.02□□□□□ -1.77
CHD8-207ENST00000554384 TAS2R3Q9NYW6 316 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 KIF13BQ9NQT8 1826 aa4.02□□□□□ -1.77
CHD8-207ENST00000554384 C4AP0C0L4 1744 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 SBF1O95248 1867 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 ARFGEF1Q9Y6D6 1849 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 TRAV9-2A0A087WT02 112 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 RNF222A6NCQ9 220 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 LRIT2A6NDA9 550 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 TRABD2BA6NFA1 517 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 ZSCAN5CA6NGD5 496 aaPredicted RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 E2F3O00716 465 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 PDXKO00764 312 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 SMPD2O60906 423 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 SCGB2A1O75556 95 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 TRIM16O95361 564 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 GSTT2P0CG29 244 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 GSTT2BP0CG30 244 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 RRASP10301 218 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 NCF1P14598 390 aaPredicted RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 ARF4P18085 180 aaPredicted RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 HMGB2P26583 209 aaKnown RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 MRPS6P82932 125 aaKnown RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 HTD2P86397 168 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 INAQ16352 499 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 CNPY1Q3B7I2 92 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 TMEM52BQ4KMG9 183 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 EIPR1Q53HC9 387 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 DNAJC21Q5F1R6 531 aaKnown RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 MS4A13Q5J8X5 152 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 BEND6Q5SZJ8 279 aaPredicted RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 PRR5LQ6MZQ0 368 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 CCBE1Q6UXH8 406 aaPredicted RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 ZNF562Q6V9R5 426 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 HACD2Q6Y1H2 254 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 TMUB2Q71RG4 321 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 P4HA3Q7Z4N8 544 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 RANBP3LQ86VV4 465 aaPredicted RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 SLC22A18ASQ8N1D0 253 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 BCORP1Q8N888 145 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 U2AF1L4Q8WU68 220 aaKnown RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 TOMM40LQ969M1 308 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 WBP1Q96G27 269 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 MCCC1Q96RQ3 725 aaPredicted RBP4.01□□□□□ -1.77
CHD8-207ENST00000554384 RANBP9Q96S59 729 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 ABCC13Q9NSE7 274 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 CENPMQ9NSP4 180 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 ROCK1Q13464 1354 aa4.01□□□□□ -1.77
CHD8-207ENST00000554384 BRCA1P38398 1863 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms