RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PSMA8Q8TAA3 256 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 NUBPLQ8TB37 319 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 SLC2A12Q8TD20 617 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PAQR8Q8TEZ7 354 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF721Q8TF20 911 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PIGTQ969N2 578 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PPWD1Q96BP3 646 aaKnown RBP7.05□□□□□ -1.28
ABCD4-220ENST00000553998 NTNG2Q96CW9 530 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 THOC1Q96FV9 657 aaKnown RBP7.05□□□□□ -1.28
ABCD4-220ENST00000553998 DUSP26Q9BV47 211 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 OR8D2Q9GZM6 311 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PRDM14Q9GZV8 571 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 GLIPR2Q9H4G4 154 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF703Q9H7S9 590 aaPredicted RBP7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PROK2Q9HC23 129 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 ZFP64Q9NPA5 681 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 FAM120CQ9NX05 1096 aaKnown RBP7.05□□□□□ -1.28
ABCD4-220ENST00000553998 ALKBH4Q9NXW9 302 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 MAT2BQ9NZL9 334 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PRODH2Q9UF12 536 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF639Q9UID6 485 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.05□□□□□ -1.28
ABCD4-220ENST00000553998 NINQ8N4C6 2090 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 TLN2Q9Y4G6 2542 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 MYOCOSA0A1B0GUC4 107 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 PRSS51A0A1B0GVH4 220 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 FAM234BA2RU67 622 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 MBD3L4A6NDZ8 208 aaPredicted RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 MBD3L3A6NE82 208 aaPredicted RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 MBD3L5A6NJ08 208 aaPredicted RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 CD8B2A6NJW9 211 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 TTC36A6NLP5 189 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 KDM4EB2RXH2 506 aaPredicted RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 SLC22A2O15244 555 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 SNX3O60493 162 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 CCDC22O60826 627 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 SHOX2O60902 331 aaPredicted RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 SCN2BO60939 215 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 COQ9O75208 318 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 IL2RAP01589 272 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 PGRP06401 933 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 NCF2P19878 526 aaPredicted RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 S1PR1P21453 382 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 GPX3P22352 226 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 CTSSP25774 331 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 IL12AP29459 219 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 S100A3P33764 101 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 OPRM1P35372 400 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 SOX18P35713 384 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 PCYT1AP49585 367 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 WNT3P56703 355 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 SLC37A1P57057 533 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 RNF4P78317 190 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 PSPHP78330 225 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 DUSP2Q05923 314 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 CRYZQ08257 329 aaKnown RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 SF3B4Q15427 424 aaKnown RBP eCLIP7.04□□□□□ -1.283e-8■■■■■ 55.4
ABCD4-220ENST00000553998 PGS1Q32NB8 556 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 FAM174BQ3ZCQ3 159 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 NHSL2Q5HYW2 709 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 SPANXN4Q5MJ08 99 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 FBXW10Q5XX13 1052 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 SLC22A10Q63ZE4 541 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 ANKRD26P1Q6NSI1 321 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 FAM180BQ6P0A1 224 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 LYPD8Q6UX82 237 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 TMEM64Q6YI46 380 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 RNF111Q6ZNA4 994 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 DGAT2L6Q6ZPD8 337 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 MTERF4Q7Z6M4 381 aaKnown RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 OR2L13Q8N349 312 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 SLC15A4Q8N697 577 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF615Q8N8J6 731 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 C17orf47Q8NEP4 570 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 MBD3L2Q8NHZ7 208 aaPredicted RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 TSPEARQ8WU66 669 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 C10orf82Q8WW14 230 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 CIDECQ96AQ7 238 aaPredicted RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 MOAP1Q96BY2 351 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 ELP4Q96EB1 424 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 TEX37Q96LM6 180 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 Q96MF0 132 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 TIMP4Q99727 224 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 ELAC2Q9BQ52 826 aaKnown RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 YIPF4Q9BSR8 244 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF385DQ9H6B1 395 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 CALHM2Q9HA72 323 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 NTMQ9P121 344 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 PCDHGB4Q9UN71 923 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 C19orf53Q9UNZ5 99 aaPredicted RBP7.04□□□□□ -1.28
ABCD4-220ENST00000553998 ERVK-19Q9WJR5 959 aa7.04□□□□□ -1.28
ABCD4-220ENST00000553998 ANKRD33BA6NCL7 494 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 LRRC3CA6NJW4 275 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 CFLARO15519 480 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 EMC8O43402 210 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 SMPD2O60906 423 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 SOX30O94993 753 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 PSMG1O95456 288 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 C6orf47O95873 294 aa7.03□□□□□ -1.28
ABCD4-220ENST00000553998 CBX7O95931 251 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms