RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 C16orf62Q7Z3J2 963 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CPEB2Q7Z5Q1 589 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SPATA24Q86W54 205 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 KRT73Q86Y46 540 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 MSRB3Q8IXL7 192 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 FAM26EQ8N5C1 309 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 RNF148Q8N7C7 305 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SLC38A9Q8NBW4 561 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 OR9A2Q8NGT5 310 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 OR5AK3PQ8NH89 298 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 FIG4Q92562 907 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SLC9A6Q92581 669 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 ITFG2Q969R8 447 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 PPWD1Q96BP3 646 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CTHRC1Q96CG8 243 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CCDC124Q96CT7 223 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 HSPBAP1Q96EW2 488 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 DUS3LQ96G46 650 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 AURKBQ96GD4 344 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SENP5Q96HI0 755 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 RSRC1Q96IZ7 334 aaKnown RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SLC45A3Q96JT2 553 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CLPTM1LQ96KA5 538 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SLC46A1Q96NT5 459 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 LPAR4Q99677 370 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SLC39A3Q9BRY0 314 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CRB3Q9BUF7 120 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SPRY4Q9C004 299 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 VN1R1Q9GZP7 353 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 OR10A5Q9H207 317 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 CHST8Q9H2A9 424 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 OR51I1Q9H343 314 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 PIF1Q9H611 641 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 EPS8L2Q9H6S3 715 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 MTHFD2LQ9H903 347 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-202ENST00000553619 HHATLQ9HCP6 504 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 Q9N2J8 555 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 A4GALTQ9NPC4 353 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SLAMF7Q9NQ25 335 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 POLE3Q9NRF9 147 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 DUSP22Q9NRW4 184 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 LANCL2Q9NS86 450 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 OLAHQ9NV23 265 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 MAT2BQ9NZL9 334 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 MYOTQ9UBF9 498 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF639Q9UID6 485 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 C3orf18Q9UK00 162 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 ANGPTL2Q9UKU9 493 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 BAG5Q9UL15 447 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 SATB2Q9UPW6 733 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 IFT52Q9Y366 437 aa4.65□□□□□ -1.67
VTI1B-202ENST00000553619 NUP210LQ5VU65 1888 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 BDP1A6H8Y1 2624 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 C9orf118A6NHY6 69 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 A8MUA0 341 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 M0QX08 132 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 HMGN4O00479 90 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PEX12O00623 359 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ACOT8O14734 319 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ARPC2O15144 300 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 CASC3O15234 703 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SUV39H1O43463 412 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SLC28A2O43868 658 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 RAD1O60671 282 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 STX11O75558 287 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 JRKO75564 520 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 NKX2-2O95096 273 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PSMG1O95456 288 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 GPIP06744 558 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 TFPTP0C1Z6 253 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 FCGR1AP12314 374 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ETFAP13804 333 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ETS2P15036 469 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ZNF28P17035 718 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ITGA2P17301 1181 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 TNFRSF1AP19438 455 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ATP6V1C1P21283 382 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 S1PR1P21453 382 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 DRD5P21918 477 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 MMP11P24347 488 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PSMA4P25789 261 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SLC7A1P30825 629 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 IFNA8P32881 189 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 GABRA3P34903 492 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ETV5P41161 510 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PPICP45877 212 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 PGDP52209 483 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ARHGDIAP52565 204 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 NRG3P56975 720 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SELENOWP63302 87 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 GABREP78334 506 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 MRPS22P82650 360 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 MGAT2Q10469 447 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SELPLGQ14242 412 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 LASP1Q14847 261 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 KPNB1Q14974 876 aaKnown RBP4.64□□□□□ -1.67
VTI1B-202ENST00000553619 EXT1Q16394 746 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 DECR1Q16698 335 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 ARHGAP11BQ3KRB8 267 aa4.64□□□□□ -1.67
VTI1B-202ENST00000553619 SFT2D3Q587I9 215 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms