RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 M0R3G1 203 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 M0R3H8 397 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PCDHGA12O60330 932 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 BRINP1O60477 761 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 FAM20BO75063 409 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 LDB3O75112 727 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 SEMA7AO75326 666 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 WBP4O75554 376 aaKnown RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 OR6B1O95007 311 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 CYC1P08574 325 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ACP2P11117 423 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 CYP4B1P13584 511 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 GABRB1P18505 474 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ENDOUP21128 410 aaKnown RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 BCKDHBP21953 392 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PCMT1P22061 227 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PAX7P23759 505 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 CHMP24386 653 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 FPR3P25089 353 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 TRHRP34981 398 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 STAT5AP42229 794 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 YAP1P46937 504 aaKnown RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 FNTBP49356 437 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PPM1FP49593 454 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ST13P50502 369 aaKnown RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 SMSP52788 366 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PDX1P52945 283 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 RGS8P57771 180 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PPP1CAP62136 330 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 EEF1A1P68104 462 aaKnown RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 FUT7Q11130 342 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 TSPAN31Q12999 210 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 TARDBPQ13148 414 aaKnown RBP eCLIP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PMS2P3Q13401 168 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PIN1Q13526 163 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 TBCEQ15813 527 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 TRMT12Q53H54 448 aaKnown RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 TMEM201Q5SNT2 666 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 SYT6Q5T7P8 510 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 UBE2UQ5VVX9 321 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 RNLSQ5VYX0 342 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PMS2CLQ68D20 193 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ANKRD34AQ69YU3 496 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 GTF2IRD2BQ6EKJ0 949 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 RPL13AP3Q6NVV1 102 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PODNL1Q6PEZ8 512 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 KLHL17Q6TDP4 642 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 CASP12Q6UXS9 341 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 QSOX2Q6ZRP7 698 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 PRSS41Q7RTY9 318 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 GTF2IRD2Q86UP8 949 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 CLVS1Q8IUQ0 354 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 SLITRK4Q8IW52 837 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 SFTPA2Q8IWL1 248 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 OR4N5Q8IXE1 308 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 GPR135Q8IZ08 494 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 SLC25A45Q8N413 288 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 DEFB119Q8N690 84 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 FAM181AQ8N9Y4 354 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 MORN4Q8NDC4 146 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 OR4K5Q8NGD3 323 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 OR9Q2Q8NGE9 314 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 OR5T3Q8NGG3 340 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 OR4D11Q8NGI4 311 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 VANGL1Q8TAA9 524 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 CEP76Q8TAP6 659 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 CNIH3Q8TBE1 160 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 GPR151Q8TDV0 419 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 GAB3Q8WWW8 586 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 DIO2Q92813 273 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 CDS1Q92903 461 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 NAT6Q93015 286 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 TP53INP1Q96A56 240 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 CRELD1Q96HD1 420 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ART5Q96L15 291 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 HS6ST2Q96MM7 605 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 SIGLEC11Q96RL6 698 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF559Q9BR84 538 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 YIPF4Q9BSR8 244 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 NDC1Q9BTX1 674 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ALOXE3Q9BYJ1 711 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF768Q9H5H4 540 aaKnown RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 GPN2Q9H9Y4 310 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 SLC25A19Q9HC21 320 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 Q9N2J8 555 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 ADAP2Q9NPF8 381 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 CUTCQ9NTM9 273 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 MED17Q9NVC6 651 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 RLIMQ9NVW2 624 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 IRAK4Q9NWZ3 460 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 REV1Q9UBZ9 1251 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 MRTO4Q9UKD2 239 aaKnown RBP6.79□□□□□ -1.32
ATXN3-221ENST00000553498 SRPK3Q9UPE1 567 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 KCNE3Q9Y6H6 103 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 SZT2Q5T011 3432 aa6.79□□□□□ -1.32
ATXN3-221ENST00000553498 IGHV5-51A0A0C4DH38 117 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 A0A1B0GTQ1 180 aa6.78□□□□□ -1.32
ATXN3-221ENST00000553498 A0A1B0GVT2 93 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms