RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 OR51Q1Q8NH59 317 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 TBC1D15Q8TC07 691 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 PMM1Q92871 262 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 RIT1Q92963 219 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 AHCYL2Q96HN2 611 aaKnown RBP10.68□□□□□ -0.7
RAB5C-208ENST00000551338 FAM46AQ96IP4 442 aaKnown RBP10.68□□□□□ -0.7
RAB5C-208ENST00000551338 VSTM2LQ96N03 204 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 DGAT2Q96PD7 388 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 PRSS27Q9BQR3 290 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 POLDIP3Q9BY77 421 aaKnown RBP10.68□□□□□ -0.7
RAB5C-208ENST00000551338 ALOXE3Q9BYJ1 711 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 POLR2J2Q9GZM3 115 aaKnown RBP10.68□□□□□ -0.7
RAB5C-208ENST00000551338 EGLN3Q9H6Z9 239 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 NECTIN3Q9NQS3 549 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 LANCL2Q9NS86 450 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 CUTCQ9NTM9 273 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 SEMA5BQ9P283 1151 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 ASXL3Q9C0F0 2248 aa10.68□□□□□ -0.7
RAB5C-208ENST00000551338 TRAPPC13A5PLN9 417 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 CDHR4A6H8M9 788 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 OR2W5A6NFC9 320 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 TMEM150CB9EJG8 249 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 CLDN4O14493 209 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 DUX1O43812 170 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 PRKYO43930 277 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 PRAMEF2O60811 474 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 PTHP01270 115 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 GKN3PP0CG01 181 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 TDGF1P13385 188 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 GLB1P16278 677 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 FPR3P25089 353 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 CD1CP29017 333 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 IFNGR2P38484 337 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 GPR3P46089 330 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 SEPHS1P49903 392 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 ST13P50502 369 aaKnown RBP10.67□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF91Q05481 1191 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 FUT7Q11130 342 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 ST3GAL4Q11206 333 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF267Q14586 743 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-208ENST00000551338 OCLNQ16625 522 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 MFSD4BQ5TF39 518 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 ZC3H14Q6PJT7 736 aaKnown RBP10.67□□□□□ -0.7
RAB5C-208ENST00000551338 MBOAT2Q6ZWT7 520 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 KANSL1Q7Z3B3 1105 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 PRSS42Q7Z5A4 293 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 RANBP3LQ86VV4 465 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-208ENST00000551338 P2RY8Q86VZ1 359 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 D2HGDHQ8N465 521 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 TOR1AIP2Q8NFQ8 470 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 OR4N2Q8NGD1 307 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 OR8J1Q8NGP2 316 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 OR1L3Q8NH93 324 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 C9orf43Q8TAL5 461 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-208ENST00000551338 TEX47Q8TBZ9 253 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 TMEM255BQ8WV15 326 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-208ENST00000551338 TRUB1Q8WWH5 349 aaKnown RBP10.67□□□□□ -0.7
RAB5C-208ENST00000551338 GAB3Q8WWW8 586 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 PELOQ9BRX2 385 aaKnown RBP10.67□□□□□ -0.7
RAB5C-208ENST00000551338 CDCA4Q9BXL8 241 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 ITPAQ9BY32 194 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 CAPN10Q9HC96 672 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 TAS2R16Q9NYV7 291 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 CNIH4Q9P003 139 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 TESQ9UGI8 421 aaKnown RBP10.67□□□□□ -0.7
RAB5C-208ENST00000551338 MUTYHQ9UIF7 546 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 ZNF223Q9UK11 482 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-208ENST00000551338 SLC7A7Q9UM01 511 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 ERVK-19Q9WJR5 959 aa10.67□□□□□ -0.7
RAB5C-208ENST00000551338 MPDZO75970 2070 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 CCDC163A0A0D9SF12 145 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 FMO6PO60774 539 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 OR2B3O76000 313 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 SOX30O94993 753 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 BCL10O95999 233 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 EPHA8P29322 1005 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-208ENST00000551338 HOXA6P31267 233 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 GALNSP34059 522 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 LIPAP38571 399 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 STAT5AP42229 794 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 GPR4P46093 362 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 GIPRP48546 466 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 DHPSP49366 369 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-208ENST00000551338 PCYT1AP49585 367 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 MLLT10P55197 1068 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 GPLD1P80108 840 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 HSD11B2P80365 405 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 EFNB1P98172 346 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 MLLT1Q03111 559 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-208ENST00000551338 OCA2Q04671 838 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 SERTAD2Q14140 314 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 DOC2BQ14184 412 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 OR1Q1Q15612 314 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 ZNHIT3Q15649 155 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-208ENST00000551338 AMZ1Q400G9 498 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 FLYWCH1Q4VC44 716 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 PDZK1Q5T2W1 519 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 MEDAGQ5VYS4 303 aa10.66□□□□□ -0.7
RAB5C-208ENST00000551338 LYSMD4Q5XG99 296 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms