RNA–Protein interactions for RNA: ENST00000550632.5

USP15-216, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-216ENST00000550632 NPIPA5A0A0B4J1W7 369 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 GOLGA8QA0A0J9YX86 632 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 LOC390937A0A1W2PQ73 354 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 GOLGA8OA6NCC3 632 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 GOLGA6L10A6NI86 522 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 NPIPA7E9PJI5 369 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 GOLGA8NF8WBI6 632 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 GOLGA8RI6L899 631 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 ADAMDEC1O15204 470 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 S100BP04271 92 aaPredicted RBP13.02□□□□□ -0.33
USP15-216ENST00000550632 DHRS4L1P0CG22 281 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 NPIPA8P0DM63 369 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 CSNK2A2P19784 350 aaPredicted RBP13.02□□□□□ -0.33
USP15-216ENST00000550632 CD40P25942 277 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 APEX1P27695 318 aaKnown RBP13.02□□□□□ -0.33
USP15-216ENST00000550632 CHRNEQ04844 493 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 CUL3Q13618 768 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 SH2D4BQ5SQS7 431 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 GTF2IRD2BQ6EKJ0 949 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 SLC48A1Q6P1K1 146 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 SHISA2Q6UWI4 295 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 TMEM108Q6UXF1 575 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 GTF2IRD2Q86UP8 949 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 RNF214Q8ND24 703 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 OR52N5Q8NH56 324 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 FBXO17Q96EF6 278 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 VSTM2LQ96N03 204 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 C1QTNF6Q9BXI9 259 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 CAB39LQ9H9S4 337 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 PAQR5Q9NXK6 330 aaPredicted RBP13.02□□□□□ -0.33
USP15-216ENST00000550632 STOML1Q9UBI4 398 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 OPTCQ9UBM4 332 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 PCDHB10Q9UN67 800 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 OR10H1Q9Y4A9 318 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 FKBP7Q9Y680 259 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 ATP23Q9Y6H3 246 aa13.02□□□□□ -0.33
USP15-216ENST00000550632 ARFGEF3Q5TH69 2177 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 PHGDHO43175 533 aaKnown RBP13.01□□□□□ -0.33
USP15-216ENST00000550632 BMP4P12644 408 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 CD1DP15813 335 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 SHC1P29353 583 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 PHEXP78562 749 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 CPSF6Q16630 551 aaKnown RBP eCLIP13.01□□□□□ -0.33
USP15-216ENST00000550632 CDKL4Q5MAI5 379 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 ZNF544Q6NX49 715 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 SVOPLQ8N434 492 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 TEX9Q8N6V9 391 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 RNF128Q8TEB7 428 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 MAIP1Q8WWC4 291 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 SLC9A6Q92581 669 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 KLHL29Q96CT2 875 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 CNRIP1Q96F85 164 aaPredicted RBP13.01□□□□□ -0.33
USP15-216ENST00000550632 SNX18Q96RF0 628 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 USB1Q9BQ65 265 aaKnown RBP13.01□□□□□ -0.33
USP15-216ENST00000550632 INPP5KQ9BT40 448 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 RBM4Q9BWF3 364 aaKnown RBP13.01□□□□□ -0.33
USP15-216ENST00000550632 SRXN1Q9BYN0 137 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 SAYSD1Q9NPB0 183 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 MGAT4BQ9UQ53 548 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 PCDHGA11Q9Y5H2 935 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 PCDHA9Q9Y5H5 950 aa13.01□□□□□ -0.33
USP15-216ENST00000550632 C9JVG2 144 aa13□□□□□ -0.33
USP15-216ENST00000550632 K7EPI3 171 aa13□□□□□ -0.33
USP15-216ENST00000550632 M0R1B8 84 aa13□□□□□ -0.33
USP15-216ENST00000550632 WISP3O95389 354 aaPredicted RBP13□□□□□ -0.33
USP15-216ENST00000550632 GGT1P19440 569 aa13□□□□□ -0.33
USP15-216ENST00000550632 IGHV1-2P23083 117 aa13□□□□□ -0.33
USP15-216ENST00000550632 RFX3P48380 749 aa13□□□□□ -0.33
USP15-216ENST00000550632 CARD18P57730 90 aa13□□□□□ -0.33
USP15-216ENST00000550632 HILS1P60008 231 aa13□□□□□ -0.33
USP15-216ENST00000550632 MRPS22P82650 360 aaKnown RBP13□□□□□ -0.33
USP15-216ENST00000550632 ZNF239Q16600 458 aaKnown RBP13□□□□□ -0.33
USP15-216ENST00000550632 ZNF628Q5EBL2 1059 aa13□□□□□ -0.33
USP15-216ENST00000550632 TIMM23BQ5SRD1 257 aa13□□□□□ -0.33
USP15-216ENST00000550632 CCNYL2Q5T2Q4 361 aa13□□□□□ -0.33
USP15-216ENST00000550632 Q6ZT83 130 aa13□□□□□ -0.33
USP15-216ENST00000550632 TDRPQ86YL5 185 aa13□□□□□ -0.33
USP15-216ENST00000550632 PPIL6Q8IXY8 311 aa13□□□□□ -0.33
USP15-216ENST00000550632 ZNF775Q96BV0 537 aaPredicted RBP13□□□□□ -0.33
USP15-216ENST00000550632 REXO5Q96IC2 774 aaKnown RBP13□□□□□ -0.33
USP15-216ENST00000550632 VRK1Q99986 396 aaPredicted RBP13□□□□□ -0.33
USP15-216ENST00000550632 MRPL1Q9BYD6 325 aaKnown RBP13□□□□□ -0.33
USP15-216ENST00000550632 CHMP2BQ9UQN3 213 aa13□□□□□ -0.33
USP15-216ENST00000550632 KMT2CQ8NEZ4 4911 aaKnown RBP12.99□□□□□ -0.33
USP15-216ENST00000550632 LILRA1O75019 489 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 PIAS1O75925 651 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 SLU7O95391 586 aaKnown RBP12.99□□□□□ -0.33
USP15-216ENST00000550632 PTAFRP25105 342 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 CXCR5P32302 372 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 SFTPDP35247 375 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 ALDH9A1P49189 494 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 CDH15P55291 814 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 RAC1P63000 192 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 CCNIQ14094 377 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 ZSWIM7Q19AV6 140 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 MST1LQ2TV78 715 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 RNASEH2BQ5TBB1 312 aaKnown RBP12.99□□□□□ -0.33
USP15-216ENST00000550632 DEF8Q6ZN54 512 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 ESPNLQ6ZVH7 1005 aa12.99□□□□□ -0.33
USP15-216ENST00000550632 CCDC116Q8IYX3 515 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms