RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 A8MUA0 341 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 PIP5K1CO60331 668 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 CD3GP09693 182 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 NAT2P11245 290 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 GIFP27352 417 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 TRHRP34981 398 aaPredicted RBP12.83□□□□□ -0.35
HDAC7-228ENST00000548938 PPM1AP35813 382 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 IKZF1Q13422 519 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 TRAM2Q15035 370 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 SFXN4Q6P4A7 337 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 LCTLQ6UWM7 567 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 RRM2BQ7LG56 351 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 C11orf96Q7Z7L8 435 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 C17orf64Q86WR6 236 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 NUDT13Q86X67 352 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 CPOQ8IVL8 374 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 NKAIN4Q8IVV8 208 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 CEP76Q8TAP6 659 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 PIGXQ8TBF5 258 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 SETD7Q8WTS6 366 aaKnown RBP12.83□□□□□ -0.35
HDAC7-228ENST00000548938 DIO2Q92813 273 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 ZG16BQ96DA0 208 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 RHBGQ9H310 441 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 ERVMER34-1Q9H9K5 563 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 IL23AQ9NPF7 189 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 ZNF224Q9NZL3 707 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 CLEC4AQ9UMR7 237 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 PRKAB1Q9Y478 270 aa12.83□□□□□ -0.35
HDAC7-228ENST00000548938 NDUFS4O43181 175 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 SOX30O94993 753 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 NFATC1O95644 943 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 NPR2P20594 1047 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 ACADLP28330 430 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 CCR6P51684 374 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 NCBP2P52298 156 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDAC7-228ENST00000548938 AANATQ16613 207 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 VRK2Q86Y07 508 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 TRMT10AQ8TBZ6 339 aaKnown RBP12.83□□□□□ -0.36
HDAC7-228ENST00000548938 DACT3Q96B18 629 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-228ENST00000548938 OR2M2Q96R28 347 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 TIMP4Q99727 224 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 PINK1Q9BXM7 581 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 CHST2Q9Y4C5 530 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 NUBP2Q9Y5Y2 271 aa12.83□□□□□ -0.36
HDAC7-228ENST00000548938 TSPAN11A1L157 253 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 CASC3O15234 703 aaKnown RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 CFDP00746 253 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 FGBP02675 491 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 HMGN2P05204 90 aaKnown RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 GALP22466 123 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 PTGS2P35354 604 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 TAGLNQ01995 201 aaKnown RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 KLHL12Q53G59 568 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 FAAH2Q6GMR7 532 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 ARL9Q6T311 187 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 UBE3DQ7Z6J8 389 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 TMEM99Q8N816 258 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 OSTF1Q92882 214 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 HGDQ93099 445 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 C16orf58Q96GQ5 468 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 RBP7Q96R05 134 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 ALG8Q9BVK2 526 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 ZBP1Q9H171 429 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 MARK1Q9P0L2 795 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 PCYT1BQ9Y5K3 369 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 SLC9B1P1A6NJY1 282 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 H7BY64 318 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 GPR171O14626 319 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 TGM5O43548 720 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 POP7O75817 140 aaKnown RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 STATHP02808 62 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 METAP1P53582 386 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 EPHA5P54756 1037 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 VSX2P58304 361 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 HSF2Q03933 536 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 CRYZQ08257 329 aaKnown RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 CAMK2DQ13557 499 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 ST3GAL2Q16842 350 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 ZNF750Q32MQ0 723 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 SLC25A35Q3KQZ1 300 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 ZNF805Q5CZA5 627 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 ZNF311Q5JNZ3 666 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 CLLU1Q5K131 121 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 NDUFAF5Q5TEU4 345 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 ZNF620Q6ZNG0 422 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 PARS2Q7L3T8 475 aaKnown RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 CDH24Q86UP0 819 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 GRAMD2AQ8IUY3 354 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 SIAH3Q8IW03 269 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 NRMQ8IXM6 262 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 ZNF687Q8N1G0 1237 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 PIAS4Q8N2W9 510 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 PRAP1Q96NZ9 151 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 SMAD5Q99717 465 aaKnown RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 AIF1LQ9BQI0 150 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 DPH7Q9BTV6 452 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 SLC46A2Q9BY10 475 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 CLEC4MQ9H2X3 399 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-228ENST00000548938 EPHX3Q9H6B9 360 aa12.82□□□□□ -0.36
HDAC7-228ENST00000548938 MED20Q9H944 212 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms